Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.07□□□□□ -0.32
UBA52P62987 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
UBA52P62987 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBA52P62987 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UBA52P62987 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
UBA52P62987 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBA52P62987 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.06□□□□□ -0.32
UBA52P62987 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
UBA52P62987 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBA52P62987 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.06□□□□□ -0.32
UBA52P62987 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UBA52P62987 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.06□□□□□ -0.32
UBA52P62987 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBA52P62987 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.06□□□□□ -0.32
UBA52P62987 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UBA52P62987 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UBA52P62987 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.06□□□□□ -0.32
UBA52P62987 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBA52P62987 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
UBA52P62987 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UBA52P62987 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.06□□□□□ -0.32
UBA52P62987 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.06□□□□□ -0.32
UBA52P62987 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.06□□□□□ -0.32
UBA52P62987 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
UBA52P62987 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.06□□□□□ -0.32
UBA52P62987 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.06□□□□□ -0.32
UBA52P62987 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.06□□□□□ -0.32
UBA52P62987 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.06□□□□□ -0.32
UBA52P62987 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
UBA52P62987 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.06□□□□□ -0.32
UBA52P62987 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
UBA52P62987 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
UBA52P62987 AC008494.3-201ENST00000606615 944 ntBASIC13.06□□□□□ -0.32
UBA52P62987 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UBA52P62987 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
UBA52P62987 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBA52P62987 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBA52P62987 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.06□□□□□ -0.32
UBA52P62987 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBA52P62987 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
UBA52P62987 AC011474.4-201ENST00000623523 2076 ntBASIC13.06□□□□□ -0.32
UBA52P62987 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UBA52P62987 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBA52P62987 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.06□□□□□ -0.32
UBA52P62987 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBA52P62987 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBA52P62987 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBA52P62987 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.06□□□□□ -0.32
UBA52P62987 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBA52P62987 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBA52P62987 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UBA52P62987 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBA52P62987 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBA52P62987 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UBA52P62987 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
UBA52P62987 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBA52P62987 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
UBA52P62987 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UBA52P62987 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UBA52P62987 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
UBA52P62987 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBA52P62987 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBA52P62987 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBA52P62987 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
UBA52P62987 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBA52P62987 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBA52P62987 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UBA52P62987 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
UBA52P62987 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBA52P62987 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBA52P62987 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UBA52P62987 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBA52P62987 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBA52P62987 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.05□□□□□ -0.32
UBA52P62987 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.05□□□□□ -0.32
UBA52P62987 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.05□□□□□ -0.32
UBA52P62987 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.05□□□□□ -0.32
UBA52P62987 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UBA52P62987 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.05□□□□□ -0.32
UBA52P62987 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.05□□□□□ -0.32
UBA52P62987 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.05□□□□□ -0.32
UBA52P62987 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.05□□□□□ -0.32
UBA52P62987 AL512361.1-201ENST00000554200 418 ntBASIC13.05□□□□□ -0.32
UBA52P62987 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.05□□□□□ -0.32
UBA52P62987 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UBA52P62987 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.05□□□□□ -0.32
UBA52P62987 AL162274.1-201ENST00000617191 1098 ntBASIC13.05□□□□□ -0.32
UBA52P62987 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBA52P62987 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBA52P62987 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UBA52P62987 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UBA52P62987 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBA52P62987 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.05□□□□□ -0.32
UBA52P62987 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
UBA52P62987 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
UBA52P62987 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UBA52P62987 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
UBA52P62987 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.05□□□□□ -0.32
UBA52P62987 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.05□□□□□ -0.32
UBA52P62987 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms