Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
AP1S1P61966 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP1S1P61966 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.06■□□□□ 0
AP1S1P61966 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.06■□□□□ 0
AP1S1P61966 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP1S1P61966 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP1S1P61966 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
AP1S1P61966 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.06■□□□□ 0
AP1S1P61966 AC009093.2-202ENST00000620513 2079 ntBASIC15.05■□□□□ 0
AP1S1P61966 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
AP1S1P61966 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
AP1S1P61966 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
AP1S1P61966 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.05■□□□□ 0
AP1S1P61966 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.05■□□□□ 0
AP1S1P61966 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.05■□□□□ 0
AP1S1P61966 AC018529.2-202ENST00000611482 3087 ntBASIC15.05■□□□□ 0
AP1S1P61966 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.05■□□□□ -0
AP1S1P61966 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
AP1S1P61966 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.05■□□□□ -0
AP1S1P61966 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
AP1S1P61966 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
AP1S1P61966 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.05■□□□□ -0
AP1S1P61966 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.05■□□□□ -0
AP1S1P61966 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.05■□□□□ -0
AP1S1P61966 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.05■□□□□ -0
AP1S1P61966 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.05■□□□□ -0
AP1S1P61966 MIR4683-201ENST00000579659 81 ntBASIC15.05■□□□□ -0
AP1S1P61966 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.05■□□□□ -0
AP1S1P61966 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.05■□□□□ -0
AP1S1P61966 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.05■□□□□ -0
AP1S1P61966 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
AP1S1P61966 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.05■□□□□ -0
AP1S1P61966 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.05■□□□□ -0
AP1S1P61966 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
AP1S1P61966 AC007292.2-201ENST00000593524 1812 ntBASIC15.05■□□□□ -0
AP1S1P61966 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.05■□□□□ -0
AP1S1P61966 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.05■□□□□ -0
AP1S1P61966 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
AP1S1P61966 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.05■□□□□ -0
AP1S1P61966 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
AP1S1P61966 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.05■□□□□ -0
AP1S1P61966 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
AP1S1P61966 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
AP1S1P61966 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
AP1S1P61966 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
AP1S1P61966 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
AP1S1P61966 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
AP1S1P61966 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
AP1S1P61966 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.04■□□□□ -0
AP1S1P61966 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.04■□□□□ -0
AP1S1P61966 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.04■□□□□ -0
AP1S1P61966 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.04■□□□□ -0
AP1S1P61966 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.04■□□□□ -0
AP1S1P61966 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.04■□□□□ -0
AP1S1P61966 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.04■□□□□ -0
AP1S1P61966 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
AP1S1P61966 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.04■□□□□ -0
AP1S1P61966 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.04■□□□□ -0
AP1S1P61966 AC092135.3-201ENST00000624151 1846 ntBASIC15.04■□□□□ -0
AP1S1P61966 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
AP1S1P61966 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
AP1S1P61966 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.04■□□□□ -0
AP1S1P61966 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
AP1S1P61966 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
AP1S1P61966 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
AP1S1P61966 MRPL37P1-201ENST00000592451 1337 ntBASIC15.04■□□□□ -0
AP1S1P61966 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.04■□□□□ -0
AP1S1P61966 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
AP1S1P61966 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.04■□□□□ -0
AP1S1P61966 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.04■□□□□ -0
AP1S1P61966 AC079178.1-201ENST00000420915 656 ntBASIC15.04■□□□□ -0
AP1S1P61966 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.04■□□□□ -0
AP1S1P61966 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.04■□□□□ -0
AP1S1P61966 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.04■□□□□ -0
AP1S1P61966 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.04■□□□□ -0
AP1S1P61966 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.04■□□□□ -0
AP1S1P61966 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.04■□□□□ -0
AP1S1P61966 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
AP1S1P61966 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.04■□□□□ -0
AP1S1P61966 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.04■□□□□ -0
AP1S1P61966 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.04■□□□□ -0
AP1S1P61966 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.04■□□□□ -0
AP1S1P61966 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
AP1S1P61966 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
AP1S1P61966 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.04■□□□□ -0
AP1S1P61966 CICP14-201ENST00000629111 2732 ntBASIC15.04■□□□□ -0
AP1S1P61966 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.04■□□□□ -0
AP1S1P61966 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.04■□□□□ -0
AP1S1P61966 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.04■□□□□ -0
AP1S1P61966 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.04■□□□□ -0
AP1S1P61966 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
AP1S1P61966 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.04■□□□□ -0
AP1S1P61966 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
AP1S1P61966 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
AP1S1P61966 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.03■□□□□ -0
AP1S1P61966 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP1S1P61966 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.03■□□□□ -0
AP1S1P61966 AL023775.1-201ENST00000454907 1746 ntBASIC15.03■□□□□ -0
AP1S1P61966 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.03■□□□□ -0
AP1S1P61966 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms