Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RAB5BP61020 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
RAB5BP61020 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC11.73□□□□□ -0.53
RAB5BP61020 PCDHB19P-202ENST00000625133 2914 ntBASIC11.73□□□□□ -0.53
RAB5BP61020 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RAB5BP61020 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC11.73□□□□□ -0.53
RAB5BP61020 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC11.73□□□□□ -0.53
RAB5BP61020 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB5BP61020 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB5BP61020 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB5BP61020 TSPAN9-201ENST00000011898 4323 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB5BP61020 C2-209ENST00000452323 1999 ntTSL 2 BASIC11.72□□□□□ -0.53
RAB5BP61020 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB5BP61020 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC11.72□□□□□ -0.53
RAB5BP61020 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
RAB5BP61020 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RAB5BP61020 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
RAB5BP61020 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RAB5BP61020 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC11.72□□□□□ -0.53
RAB5BP61020 HNRNPMP1-201ENST00000560685 1768 ntBASIC11.72□□□□□ -0.53
RAB5BP61020 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB5BP61020 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC11.72□□□□□ -0.53
RAB5BP61020 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB5BP61020 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB5BP61020 DDR1-262ENST00000508312 3073 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
RAB5BP61020 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RAB5BP61020 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB5BP61020 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB5BP61020 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC11.72□□□□□ -0.53
RAB5BP61020 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC11.72□□□□□ -0.53
RAB5BP61020 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB5BP61020 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC11.72□□□□□ -0.53
RAB5BP61020 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB5BP61020 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RAB5BP61020 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB5BP61020 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB5BP61020 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RAB5BP61020 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RAB5BP61020 RPL5P21-201ENST00000404620 815 ntBASIC11.72□□□□□ -0.53
RAB5BP61020 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC11.72□□□□□ -0.53
RAB5BP61020 FAM201B-201ENST00000458407 597 ntBASIC11.72□□□□□ -0.53
RAB5BP61020 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
RAB5BP61020 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC11.72□□□□□ -0.53
RAB5BP61020 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC11.72□□□□□ -0.53
RAB5BP61020 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC11.72□□□□□ -0.53
RAB5BP61020 AC125807.2-201ENST00000513358 3514 ntBASIC11.72□□□□□ -0.53
RAB5BP61020 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB5BP61020 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RAB5BP61020 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC11.72□□□□□ -0.53
RAB5BP61020 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
RAB5BP61020 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC11.72□□□□□ -0.53
RAB5BP61020 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC11.72□□□□□ -0.53
RAB5BP61020 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RAB5BP61020 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RAB5BP61020 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB5BP61020 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB5BP61020 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
RAB5BP61020 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
RAB5BP61020 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC11.72□□□□□ -0.53
RAB5BP61020 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC11.72□□□□□ -0.53
RAB5BP61020 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RAB5BP61020 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RAB5BP61020 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB5BP61020 NXPE3-205ENST00000491511 8074 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
RAB5BP61020 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB5BP61020 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RAB5BP61020 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC11.72□□□□□ -0.53
RAB5BP61020 BIVM-ERCC5-204ENST00000639132 5195 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
RAB5BP61020 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RAB5BP61020 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB5BP61020 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
RAB5BP61020 LVRN-201ENST00000357872 4581 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB5BP61020 TCF21-202ENST00000367882 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB5BP61020 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC11.71□□□□□ -0.53
RAB5BP61020 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC11.71□□□□□ -0.53
RAB5BP61020 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC11.71□□□□□ -0.53
RAB5BP61020 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC11.71□□□□□ -0.53
RAB5BP61020 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
RAB5BP61020 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RAB5BP61020 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC11.71□□□□□ -0.53
RAB5BP61020 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC11.71□□□□□ -0.53
RAB5BP61020 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB5BP61020 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB5BP61020 AC126564.1-201ENST00000623628 2013 ntBASIC11.71□□□□□ -0.53
RAB5BP61020 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB5BP61020 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RAB5BP61020 PTGR2-205ENST00000555661 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB5BP61020 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB5BP61020 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB5BP61020 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB5BP61020 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB5BP61020 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RAB5BP61020 DPM2-202ENST00000373110 738 ntTSL 2 BASIC11.71□□□□□ -0.53
RAB5BP61020 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
RAB5BP61020 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC11.71□□□□□ -0.53
RAB5BP61020 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RAB5BP61020 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC11.71□□□□□ -0.53
RAB5BP61020 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
RAB5BP61020 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC11.71□□□□□ -0.53
RAB5BP61020 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC11.71□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms