Protein–RNA interactions for Protein: P59091

LINC00315, Putative uncharacterized protein encoded by LINC00315, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00315P59091 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00315P59091 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00315P59091 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
LINC00315P59091 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00315P59091 AC007541.1-201ENST00000570282 1469 ntBASIC10.81□□□□□ -0.68
LINC00315P59091 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00315P59091 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
LINC00315P59091 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00315P59091 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC00315P59091 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00315P59091 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
LINC00315P59091 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
LINC00315P59091 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC00315P59091 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
LINC00315P59091 AL645937.2-201ENST00000396808 931 ntBASIC10.8□□□□□ -0.68
LINC00315P59091 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC10.8□□□□□ -0.68
LINC00315P59091 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC10.8□□□□□ -0.68
LINC00315P59091 GSAP-205ENST00000430584 600 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC00315P59091 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
LINC00315P59091 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
LINC00315P59091 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC00315P59091 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00315P59091 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC10.8□□□□□ -0.68
LINC00315P59091 AP005018.1-201ENST00000525475 301 ntBASIC10.8□□□□□ -0.68
LINC00315P59091 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
LINC00315P59091 RAB35-202ENST00000534951 939 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00315P59091 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC10.8□□□□□ -0.68
LINC00315P59091 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC00315P59091 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00315P59091 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 TEX48-202ENST00000612244 662 ntTSL 3 BASIC10.8□□□□□ -0.68
LINC00315P59091 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC00315P59091 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC10.8□□□□□ -0.68
LINC00315P59091 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC00315P59091 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00315P59091 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 AC020910.6-201ENST00000623084 1459 ntBASIC10.8□□□□□ -0.68
LINC00315P59091 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
LINC00315P59091 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC00315P59091 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00315P59091 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 AC079781.5-202ENST00000641784 3743 ntBASIC10.8□□□□□ -0.68
LINC00315P59091 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
LINC00315P59091 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00315P59091 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
LINC00315P59091 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC00315P59091 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00315P59091 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00315P59091 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00315P59091 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
LINC00315P59091 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC00315P59091 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00315P59091 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00315P59091 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00315P59091 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00315P59091 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
LINC00315P59091 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
LINC00315P59091 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00315P59091 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00315P59091 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC00315P59091 DRD5P1-201ENST00000456605 1438 ntBASIC10.79□□□□□ -0.68
LINC00315P59091 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC10.79□□□□□ -0.68
LINC00315P59091 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00315P59091 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms