Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
GFRA1P56159 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GFRA1P56159 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GFRA1P56159 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GFRA1P56159 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.38□□□□□ -0.27
GFRA1P56159 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
GFRA1P56159 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.38□□□□□ -0.27
GFRA1P56159 AC018442.1-201ENST00000421439 2061 ntBASIC13.38□□□□□ -0.27
GFRA1P56159 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GFRA1P56159 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
GFRA1P56159 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GFRA1P56159 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GFRA1P56159 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.38□□□□□ -0.27
GFRA1P56159 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
GFRA1P56159 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
GFRA1P56159 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.38□□□□□ -0.27
GFRA1P56159 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GFRA1P56159 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
GFRA1P56159 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GFRA1P56159 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GFRA1P56159 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.37□□□□□ -0.27
GFRA1P56159 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.37□□□□□ -0.27
GFRA1P56159 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GFRA1P56159 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
GFRA1P56159 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GFRA1P56159 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
GFRA1P56159 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GFRA1P56159 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.37□□□□□ -0.27
GFRA1P56159 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
GFRA1P56159 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
GFRA1P56159 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
GFRA1P56159 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GFRA1P56159 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GFRA1P56159 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.37□□□□□ -0.27
GFRA1P56159 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GFRA1P56159 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
GFRA1P56159 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.37□□□□□ -0.27
GFRA1P56159 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GFRA1P56159 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.37□□□□□ -0.27
GFRA1P56159 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.37□□□□□ -0.27
GFRA1P56159 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
GFRA1P56159 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
GFRA1P56159 PUDPP3-201ENST00000445368 636 ntBASIC13.37□□□□□ -0.27
GFRA1P56159 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.37□□□□□ -0.27
GFRA1P56159 ZNF767P-206ENST00000513792 565 ntBASIC13.37□□□□□ -0.27
GFRA1P56159 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC13.37□□□□□ -0.27
GFRA1P56159 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.37□□□□□ -0.27
GFRA1P56159 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GFRA1P56159 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.37□□□□□ -0.27
GFRA1P56159 AC005730.2-201ENST00000564549 1184 ntBASIC13.37□□□□□ -0.27
GFRA1P56159 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.37□□□□□ -0.27
GFRA1P56159 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.37□□□□□ -0.27
GFRA1P56159 AC243960.2-201ENST00000600996 747 ntBASIC13.37□□□□□ -0.27
GFRA1P56159 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.37□□□□□ -0.27
GFRA1P56159 AL162426.1-201ENST00000624141 743 ntBASIC13.37□□□□□ -0.27
GFRA1P56159 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.37□□□□□ -0.27
GFRA1P56159 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GFRA1P56159 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GFRA1P56159 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
GFRA1P56159 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
GFRA1P56159 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.37□□□□□ -0.27
GFRA1P56159 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GFRA1P56159 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
GFRA1P56159 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.37□□□□□ -0.27
GFRA1P56159 E2F3P2-201ENST00000447755 1422 ntBASIC13.37□□□□□ -0.27
GFRA1P56159 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GFRA1P56159 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
GFRA1P56159 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.37□□□□□ -0.27
GFRA1P56159 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
GFRA1P56159 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GFRA1P56159 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.37□□□□□ -0.27
GFRA1P56159 AC144831.1-201ENST00000573312 2656 ntBASIC13.36□□□□□ -0.27
GFRA1P56159 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
GFRA1P56159 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GFRA1P56159 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
GFRA1P56159 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
GFRA1P56159 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
GFRA1P56159 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.36□□□□□ -0.27
GFRA1P56159 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GFRA1P56159 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.36□□□□□ -0.27
GFRA1P56159 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GFRA1P56159 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.36□□□□□ -0.27
GFRA1P56159 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
GFRA1P56159 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GFRA1P56159 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
GFRA1P56159 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.36□□□□□ -0.27
GFRA1P56159 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GFRA1P56159 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.36□□□□□ -0.27
GFRA1P56159 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
GFRA1P56159 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GFRA1P56159 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
GFRA1P56159 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
GFRA1P56159 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GFRA1P56159 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GFRA1P56159 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
GFRA1P56159 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.36□□□□□ -0.27
GFRA1P56159 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.36□□□□□ -0.27
GFRA1P56159 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC13.36□□□□□ -0.27
GFRA1P56159 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.36□□□□□ -0.27
GFRA1P56159 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms