Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CDH11P55287 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH11P55287 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH11P55287 KRT17P7-201ENST00000451704 1104 ntBASIC13.82□□□□□ -0.2
CDH11P55287 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH11P55287 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH11P55287 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH11P55287 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.82□□□□□ -0.2
CDH11P55287 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH11P55287 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDH11P55287 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CDH11P55287 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.82□□□□□ -0.2
CDH11P55287 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH11P55287 TP53TG3HP-202ENST00000569755 579 ntBASIC13.82□□□□□ -0.2
CDH11P55287 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH11P55287 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.82□□□□□ -0.2
CDH11P55287 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.82□□□□□ -0.2
CDH11P55287 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
CDH11P55287 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH11P55287 AL645728.2-202ENST00000641679 227 ntBASIC13.82□□□□□ -0.2
CDH11P55287 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CDH11P55287 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH11P55287 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CDH11P55287 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CDH11P55287 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH11P55287 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDH11P55287 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH11P55287 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDH11P55287 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH11P55287 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH11P55287 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH11P55287 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH11P55287 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CDH11P55287 BEND3P1-201ENST00000421591 1944 ntBASIC13.82□□□□□ -0.2
CDH11P55287 AL391825.1-201ENST00000457671 1364 ntBASIC13.82□□□□□ -0.2
CDH11P55287 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDH11P55287 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.82□□□□□ -0.2
CDH11P55287 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH11P55287 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH11P55287 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDH11P55287 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH11P55287 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDH11P55287 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDH11P55287 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CDH11P55287 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH11P55287 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.81□□□□□ -0.2
CDH11P55287 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CDH11P55287 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH11P55287 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDH11P55287 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDH11P55287 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH11P55287 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH11P55287 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDH11P55287 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDH11P55287 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.81□□□□□ -0.2
CDH11P55287 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CDH11P55287 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CDH11P55287 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDH11P55287 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDH11P55287 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.81□□□□□ -0.2
CDH11P55287 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH11P55287 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH11P55287 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDH11P55287 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDH11P55287 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
CDH11P55287 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH11P55287 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
CDH11P55287 AL133267.1-201ENST00000398220 340 ntBASIC13.81□□□□□ -0.2
CDH11P55287 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.81□□□□□ -0.2
CDH11P55287 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDH11P55287 AC244107.1-201ENST00000442033 332 ntBASIC13.81□□□□□ -0.2
CDH11P55287 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.81□□□□□ -0.2
CDH11P55287 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.81□□□□□ -0.2
CDH11P55287 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.81□□□□□ -0.2
CDH11P55287 AC055876.2-201ENST00000531834 546 ntBASIC13.81□□□□□ -0.2
CDH11P55287 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.81□□□□□ -0.2
CDH11P55287 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.81□□□□□ -0.2
CDH11P55287 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH11P55287 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.81□□□□□ -0.2
CDH11P55287 AC074044.1-201ENST00000609673 707 ntBASIC13.81□□□□□ -0.2
CDH11P55287 AC004461.2-201ENST00000629517 803 ntBASIC13.81□□□□□ -0.2
CDH11P55287 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDH11P55287 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.81□□□□□ -0.2
CDH11P55287 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.81□□□□□ -0.2
CDH11P55287 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH11P55287 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.81□□□□□ -0.2
CDH11P55287 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH11P55287 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.81□□□□□ -0.2
CDH11P55287 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDH11P55287 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH11P55287 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDH11P55287 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH11P55287 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.81□□□□□ -0.2
CDH11P55287 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
CDH11P55287 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH11P55287 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDH11P55287 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.81□□□□□ -0.2
CDH11P55287 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH11P55287 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDH11P55287 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms