Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDE1AP54750 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDE1AP54750 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDE1AP54750 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
PDE1AP54750 HSPA7-201ENST00000445535 1927 ntBASIC18.23■□□□□ 0.51
PDE1AP54750 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
PDE1AP54750 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
PDE1AP54750 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDE1AP54750 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC18.22■□□□□ 0.51
PDE1AP54750 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDE1AP54750 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE1AP54750 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE1AP54750 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE1AP54750 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE1AP54750 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE1AP54750 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PDE1AP54750 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PDE1AP54750 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE1AP54750 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDE1AP54750 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE1AP54750 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PDE1AP54750 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE1AP54750 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE1AP54750 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC18.22■□□□□ 0.51
PDE1AP54750 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.22■□□□□ 0.51
PDE1AP54750 C2orf27AP3-201ENST00000434123 579 ntBASIC18.22■□□□□ 0.51
PDE1AP54750 AC016694.1-201ENST00000434179 700 ntBASIC18.22■□□□□ 0.51
PDE1AP54750 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.22■□□□□ 0.51
PDE1AP54750 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDE1AP54750 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDE1AP54750 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDE1AP54750 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE1AP54750 AC078819.1-201ENST00000547454 765 ntBASIC18.22■□□□□ 0.51
PDE1AP54750 AC012085.1-201ENST00000548270 765 ntBASIC18.22■□□□□ 0.51
PDE1AP54750 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC18.22■□□□□ 0.51
PDE1AP54750 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.22■□□□□ 0.51
PDE1AP54750 AL354718.3-201ENST00000616414 581 ntBASIC18.22■□□□□ 0.51
PDE1AP54750 CR382287.1-201ENST00000623954 586 ntBASIC18.22■□□□□ 0.51
PDE1AP54750 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC18.22■□□□□ 0.51
PDE1AP54750 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE1AP54750 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC18.22■□□□□ 0.51
PDE1AP54750 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDE1AP54750 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PDE1AP54750 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDE1AP54750 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE1AP54750 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE1AP54750 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE1AP54750 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDE1AP54750 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC18.21■□□□□ 0.51
PDE1AP54750 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PDE1AP54750 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC18.21■□□□□ 0.51
PDE1AP54750 AC117489.1-201ENST00000625169 3217 ntBASIC18.21■□□□□ 0.51
PDE1AP54750 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE1AP54750 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC18.21■□□□□ 0.51
PDE1AP54750 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.21■□□□□ 0.51
PDE1AP54750 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDE1AP54750 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE1AP54750 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC18.21■□□□□ 0.51
PDE1AP54750 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE1AP54750 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE1AP54750 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDE1AP54750 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
PDE1AP54750 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE1AP54750 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE1AP54750 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
PDE1AP54750 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE1AP54750 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PDE1AP54750 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.21■□□□□ 0.51
PDE1AP54750 AC007551.1-201ENST00000457394 519 ntBASIC18.21■□□□□ 0.51
PDE1AP54750 MYADML-201ENST00000474610 2147 ntBASIC18.21■□□□□ 0.51
PDE1AP54750 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDE1AP54750 KRT90P-201ENST00000549264 1064 ntBASIC18.21■□□□□ 0.51
PDE1AP54750 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC18.21■□□□□ 0.51
PDE1AP54750 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC18.21■□□□□ 0.51
PDE1AP54750 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC18.21■□□□□ 0.51
PDE1AP54750 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDE1AP54750 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE1AP54750 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC18.21■□□□□ 0.51
PDE1AP54750 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDE1AP54750 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDE1AP54750 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
PDE1AP54750 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC18.21■□□□□ 0.51
PDE1AP54750 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PDE1AP54750 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC18.21■□□□□ 0.5
PDE1AP54750 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
PDE1AP54750 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE1AP54750 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDE1AP54750 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE1AP54750 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PDE1AP54750 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PDE1AP54750 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC18.2■□□□□ 0.5
PDE1AP54750 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE1AP54750 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE1AP54750 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE1AP54750 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC18.2■□□□□ 0.5
PDE1AP54750 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC18.2■□□□□ 0.5
PDE1AP54750 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC18.2■□□□□ 0.5
PDE1AP54750 TKT-201ENST00000296289 1931 ntTSL 5 BASIC18.2■□□□□ 0.5
PDE1AP54750 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE1AP54750 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms