Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SLC25A1P53007 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.33□□□□□ -0.28
SLC25A1P53007 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SLC25A1P53007 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SLC25A1P53007 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SLC25A1P53007 MYADML-201ENST00000474610 2147 ntBASIC13.33□□□□□ -0.28
SLC25A1P53007 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SLC25A1P53007 SLC7A15P-201ENST00000424028 1363 ntBASIC13.32□□□□□ -0.28
SLC25A1P53007 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.32□□□□□ -0.28
SLC25A1P53007 AC016397.2-201ENST00000624848 1985 ntBASIC13.32□□□□□ -0.28
SLC25A1P53007 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SLC25A1P53007 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SLC25A1P53007 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SLC25A1P53007 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.32□□□□□ -0.28
SLC25A1P53007 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.32□□□□□ -0.28
SLC25A1P53007 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.32□□□□□ -0.28
SLC25A1P53007 INE2-201ENST00000630399 1874 ntBASIC13.32□□□□□ -0.28
SLC25A1P53007 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
SLC25A1P53007 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.32□□□□□ -0.28
SLC25A1P53007 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SLC25A1P53007 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.32□□□□□ -0.28
SLC25A1P53007 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SLC25A1P53007 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.32□□□□□ -0.28
SLC25A1P53007 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
SLC25A1P53007 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
SLC25A1P53007 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
SLC25A1P53007 SOCS2P1-201ENST00000417727 557 ntBASIC13.32□□□□□ -0.28
SLC25A1P53007 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 AC092183.1-201ENST00000469884 875 ntBASIC13.32□□□□□ -0.28
SLC25A1P53007 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.32□□□□□ -0.28
SLC25A1P53007 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.32□□□□□ -0.28
SLC25A1P53007 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.32□□□□□ -0.28
SLC25A1P53007 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.32□□□□□ -0.28
SLC25A1P53007 AC093726.1-201ENST00000608064 963 ntBASIC13.32□□□□□ -0.28
SLC25A1P53007 MIR6074-201ENST00000612054 107 ntBASIC13.32□□□□□ -0.28
SLC25A1P53007 AP005019.2-201ENST00000615104 511 ntBASIC13.32□□□□□ -0.28
SLC25A1P53007 AC093512.1-201ENST00000617969 520 ntBASIC13.32□□□□□ -0.28
SLC25A1P53007 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
SLC25A1P53007 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.32□□□□□ -0.28
SLC25A1P53007 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SLC25A1P53007 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.32□□□□□ -0.28
SLC25A1P53007 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.32□□□□□ -0.28
SLC25A1P53007 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SLC25A1P53007 AC011474.4-201ENST00000623523 2076 ntBASIC13.32□□□□□ -0.28
SLC25A1P53007 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC25A1P53007 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
SLC25A1P53007 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC25A1P53007 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SLC25A1P53007 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC25A1P53007 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC25A1P53007 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC25A1P53007 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC25A1P53007 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC25A1P53007 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC25A1P53007 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.31□□□□□ -0.28
SLC25A1P53007 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC25A1P53007 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SLC25A1P53007 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
SLC25A1P53007 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
SLC25A1P53007 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC25A1P53007 MST1P2-201ENST00000457982 2291 ntBASIC13.31□□□□□ -0.28
SLC25A1P53007 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC25A1P53007 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC25A1P53007 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC25A1P53007 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms