Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HMGA2P52926 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.66□□□□□ -0.22
HMGA2P52926 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.66□□□□□ -0.22
HMGA2P52926 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HMGA2P52926 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HMGA2P52926 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
HMGA2P52926 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.66□□□□□ -0.22
HMGA2P52926 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
HMGA2P52926 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.66□□□□□ -0.22
HMGA2P52926 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.66□□□□□ -0.22
HMGA2P52926 VDAC1P7-201ENST00000462417 847 ntBASIC13.66□□□□□ -0.22
HMGA2P52926 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
HMGA2P52926 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
HMGA2P52926 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.66□□□□□ -0.22
HMGA2P52926 AC131206.1-201ENST00000538078 1211 ntBASIC13.66□□□□□ -0.22
HMGA2P52926 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.66□□□□□ -0.22
HMGA2P52926 SNHG9-202ENST00000564014 471 ntBASIC13.66□□□□□ -0.22
HMGA2P52926 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.66□□□□□ -0.22
HMGA2P52926 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.66□□□□□ -0.22
HMGA2P52926 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.66□□□□□ -0.22
HMGA2P52926 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HMGA2P52926 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HMGA2P52926 BRI3BPP1-201ENST00000594224 787 ntBASIC13.66□□□□□ -0.22
HMGA2P52926 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HMGA2P52926 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.66□□□□□ -0.22
HMGA2P52926 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HMGA2P52926 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
HMGA2P52926 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HMGA2P52926 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HMGA2P52926 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.66□□□□□ -0.22
HMGA2P52926 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.66□□□□□ -0.22
HMGA2P52926 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
HMGA2P52926 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HMGA2P52926 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.66□□□□□ -0.22
HMGA2P52926 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
HMGA2P52926 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
HMGA2P52926 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
HMGA2P52926 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
HMGA2P52926 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HMGA2P52926 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HMGA2P52926 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
HMGA2P52926 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HMGA2P52926 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HMGA2P52926 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.65□□□□□ -0.22
HMGA2P52926 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGA2P52926 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
HMGA2P52926 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGA2P52926 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HMGA2P52926 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGA2P52926 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
HMGA2P52926 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
HMGA2P52926 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGA2P52926 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.65□□□□□ -0.22
HMGA2P52926 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGA2P52926 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGA2P52926 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HMGA2P52926 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGA2P52926 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.65□□□□□ -0.22
HMGA2P52926 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.65□□□□□ -0.22
HMGA2P52926 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.65□□□□□ -0.22
HMGA2P52926 TSEN15P1-201ENST00000423257 515 ntBASIC13.65□□□□□ -0.22
HMGA2P52926 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HMGA2P52926 AC241585.1-201ENST00000433527 519 ntBASIC13.65□□□□□ -0.22
HMGA2P52926 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.65□□□□□ -0.22
HMGA2P52926 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.65□□□□□ -0.22
HMGA2P52926 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGA2P52926 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.65□□□□□ -0.22
HMGA2P52926 GIMAP3P-201ENST00000495150 836 ntBASIC13.65□□□□□ -0.22
HMGA2P52926 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
HMGA2P52926 AC138761.1-201ENST00000584393 385 ntBASIC13.65□□□□□ -0.22
HMGA2P52926 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.65□□□□□ -0.22
HMGA2P52926 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
HMGA2P52926 AL136172.1-201ENST00000598590 1394 ntBASIC13.65□□□□□ -0.22
HMGA2P52926 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HMGA2P52926 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.65□□□□□ -0.22
HMGA2P52926 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGA2P52926 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGA2P52926 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGA2P52926 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGA2P52926 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGA2P52926 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
HMGA2P52926 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGA2P52926 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.65□□□□□ -0.22
HMGA2P52926 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGA2P52926 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGA2P52926 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
HMGA2P52926 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.23
HMGA2P52926 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGA2P52926 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.64□□□□□ -0.23
HMGA2P52926 AL359183.1-201ENST00000623796 2132 ntBASIC13.64□□□□□ -0.23
HMGA2P52926 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
HMGA2P52926 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGA2P52926 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGA2P52926 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.64□□□□□ -0.23
HMGA2P52926 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGA2P52926 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.64□□□□□ -0.23
HMGA2P52926 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGA2P52926 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGA2P52926 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
HMGA2P52926 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms