Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNA3P52797 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNA3P52797 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNA3P52797 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
EFNA3P52797 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
EFNA3P52797 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNA3P52797 AL136309.1-201ENST00000403917 691 ntBASIC14.01□□□□□ -0.17
EFNA3P52797 MIR663B-201ENST00000408361 115 ntBASIC14.01□□□□□ -0.17
EFNA3P52797 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.01□□□□□ -0.17
EFNA3P52797 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
EFNA3P52797 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.01□□□□□ -0.17
EFNA3P52797 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
EFNA3P52797 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.01□□□□□ -0.17
EFNA3P52797 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
EFNA3P52797 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.01□□□□□ -0.17
EFNA3P52797 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.01□□□□□ -0.17
EFNA3P52797 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.01□□□□□ -0.17
EFNA3P52797 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.01□□□□□ -0.17
EFNA3P52797 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
EFNA3P52797 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.01□□□□□ -0.17
EFNA3P52797 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.01□□□□□ -0.17
EFNA3P52797 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.01□□□□□ -0.17
EFNA3P52797 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNA3P52797 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.01□□□□□ -0.17
EFNA3P52797 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
EFNA3P52797 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNA3P52797 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
EFNA3P52797 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNA3P52797 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
EFNA3P52797 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNA3P52797 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNA3P52797 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNA3P52797 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNA3P52797 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNA3P52797 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNA3P52797 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.01□□□□□ -0.17
EFNA3P52797 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNA3P52797 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNA3P52797 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
EFNA3P52797 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNA3P52797 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
EFNA3P52797 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.01□□□□□ -0.17
EFNA3P52797 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.01□□□□□ -0.17
EFNA3P52797 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14□□□□□ -0.17
EFNA3P52797 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
EFNA3P52797 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14□□□□□ -0.17
EFNA3P52797 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
EFNA3P52797 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
EFNA3P52797 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
EFNA3P52797 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
EFNA3P52797 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
EFNA3P52797 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
EFNA3P52797 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
EFNA3P52797 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
EFNA3P52797 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14□□□□□ -0.17
EFNA3P52797 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14□□□□□ -0.17
EFNA3P52797 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14□□□□□ -0.17
EFNA3P52797 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
EFNA3P52797 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14□□□□□ -0.17
EFNA3P52797 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
EFNA3P52797 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14□□□□□ -0.17
EFNA3P52797 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
EFNA3P52797 AL365209.1-201ENST00000624418 6473 ntBASIC14□□□□□ -0.17
EFNA3P52797 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
EFNA3P52797 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14□□□□□ -0.17
EFNA3P52797 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
EFNA3P52797 BTBD6P1-201ENST00000412176 1267 ntBASIC14□□□□□ -0.17
EFNA3P52797 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
EFNA3P52797 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14□□□□□ -0.17
EFNA3P52797 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14□□□□□ -0.17
EFNA3P52797 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
EFNA3P52797 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14□□□□□ -0.17
EFNA3P52797 AL118558.3-201ENST00000607414 1079 ntBASIC14□□□□□ -0.17
EFNA3P52797 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14□□□□□ -0.17
EFNA3P52797 API5-203ENST00000455725 2257 ntTSL 2 BASIC14□□□□□ -0.17
EFNA3P52797 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
EFNA3P52797 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
EFNA3P52797 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
EFNA3P52797 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
EFNA3P52797 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14□□□□□ -0.17
EFNA3P52797 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
EFNA3P52797 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
EFNA3P52797 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
EFNA3P52797 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
EFNA3P52797 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
EFNA3P52797 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
EFNA3P52797 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
EFNA3P52797 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
EFNA3P52797 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14□□□□□ -0.17
EFNA3P52797 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
EFNA3P52797 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
EFNA3P52797 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14□□□□□ -0.17
EFNA3P52797 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14□□□□□ -0.17
EFNA3P52797 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
EFNA3P52797 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
EFNA3P52797 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
EFNA3P52797 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
EFNA3P52797 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
EFNA3P52797 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.99□□□□□ -0.17
EFNA3P52797 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms