Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HCFC1P51610 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
HCFC1P51610 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC12.95□□□□□ -0.34
HCFC1P51610 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HCFC1P51610 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
HCFC1P51610 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HCFC1P51610 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HCFC1P51610 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC12.95□□□□□ -0.34
HCFC1P51610 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC12.95□□□□□ -0.34
HCFC1P51610 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC12.95□□□□□ -0.34
HCFC1P51610 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC12.95□□□□□ -0.34
HCFC1P51610 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC12.95□□□□□ -0.34
HCFC1P51610 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HCFC1P51610 AC090857.1-201ENST00000527400 390 ntBASIC12.95□□□□□ -0.34
HCFC1P51610 AC242376.1-201ENST00000559033 726 ntBASIC12.95□□□□□ -0.34
HCFC1P51610 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.95□□□□□ -0.34
HCFC1P51610 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
HCFC1P51610 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC12.95□□□□□ -0.34
HCFC1P51610 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC12.95□□□□□ -0.34
HCFC1P51610 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC12.95□□□□□ -0.34
HCFC1P51610 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
HCFC1P51610 AP001065.2-201ENST00000617205 644 ntBASIC12.95□□□□□ -0.34
HCFC1P51610 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HCFC1P51610 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HCFC1P51610 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HCFC1P51610 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
HCFC1P51610 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HCFC1P51610 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HCFC1P51610 STK24-203ENST00000397517 4578 ntTSL 2 BASIC12.94□□□□□ -0.34
HCFC1P51610 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HCFC1P51610 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HCFC1P51610 AL137783.1-201ENST00000623494 1896 ntBASIC12.94□□□□□ -0.34
HCFC1P51610 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HCFC1P51610 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
HCFC1P51610 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
HCFC1P51610 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
HCFC1P51610 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HCFC1P51610 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
HCFC1P51610 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HCFC1P51610 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HCFC1P51610 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
HCFC1P51610 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HCFC1P51610 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
HCFC1P51610 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HCFC1P51610 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
HCFC1P51610 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
HCFC1P51610 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HCFC1P51610 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
HCFC1P51610 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HCFC1P51610 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HCFC1P51610 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
HCFC1P51610 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC12.94□□□□□ -0.34
HCFC1P51610 SOD2-202ENST00000367054 815 ntTSL 2 BASIC12.94□□□□□ -0.34
HCFC1P51610 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
HCFC1P51610 OR2K2-202ENST00000374428 1038 ntBASIC12.94□□□□□ -0.34
HCFC1P51610 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HCFC1P51610 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.94□□□□□ -0.34
HCFC1P51610 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC12.94□□□□□ -0.34
HCFC1P51610 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
HCFC1P51610 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.94□□□□□ -0.34
HCFC1P51610 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC12.94□□□□□ -0.34
HCFC1P51610 IGHV3-37-201ENST00000518544 340 ntBASIC12.94□□□□□ -0.34
HCFC1P51610 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC12.94□□□□□ -0.34
HCFC1P51610 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
HCFC1P51610 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
HCFC1P51610 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
HCFC1P51610 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HCFC1P51610 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC12.94□□□□□ -0.34
HCFC1P51610 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC12.94□□□□□ -0.34
HCFC1P51610 HPN-206ENST00000597419 1212 ntTSL 5 BASIC12.94□□□□□ -0.34
HCFC1P51610 AC087045.2-201ENST00000606279 1003 ntBASIC12.94□□□□□ -0.34
HCFC1P51610 AC073352.2-201ENST00000609385 439 ntBASIC12.94□□□□□ -0.34
HCFC1P51610 CMC2-224ENST00000630396 481 ntTSL 5 BASIC12.94□□□□□ -0.34
HCFC1P51610 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
HCFC1P51610 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HCFC1P51610 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.94□□□□□ -0.34
HCFC1P51610 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HCFC1P51610 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
HCFC1P51610 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
HCFC1P51610 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.94□□□□□ -0.34
HCFC1P51610 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
HCFC1P51610 CYP4F23P-201ENST00000593402 1579 ntBASIC12.94□□□□□ -0.34
HCFC1P51610 KRT18P9-201ENST00000604826 1300 ntBASIC12.94□□□□□ -0.34
HCFC1P51610 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HCFC1P51610 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HCFC1P51610 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HCFC1P51610 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HCFC1P51610 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HCFC1P51610 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HCFC1P51610 AC018629.1-201ENST00000623381 1736 ntBASIC12.93□□□□□ -0.34
HCFC1P51610 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HCFC1P51610 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HCFC1P51610 RN7SKP230-201ENST00000365642 335 ntBASIC12.93□□□□□ -0.34
HCFC1P51610 AC078875.1-201ENST00000431907 724 ntBASIC12.93□□□□□ -0.34
HCFC1P51610 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC12.93□□□□□ -0.34
HCFC1P51610 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC12.93□□□□□ -0.34
HCFC1P51610 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HCFC1P51610 TMCO5B-205ENST00000530020 894 ntBASIC12.93□□□□□ -0.34
HCFC1P51610 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC12.93□□□□□ -0.34
HCFC1P51610 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms