Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.21□□□□□ -0.13
CLK1P49759 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLK1P49759 SLED1-202ENST00000512051 380 ntBASIC14.21□□□□□ -0.13
CLK1P49759 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.21□□□□□ -0.13
CLK1P49759 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.21□□□□□ -0.13
CLK1P49759 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CLK1P49759 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.21□□□□□ -0.13
CLK1P49759 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLK1P49759 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLK1P49759 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLK1P49759 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.21□□□□□ -0.13
CLK1P49759 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.21□□□□□ -0.13
CLK1P49759 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLK1P49759 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.21□□□□□ -0.14
CLK1P49759 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
CLK1P49759 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
CLK1P49759 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CLK1P49759 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLK1P49759 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLK1P49759 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.14
CLK1P49759 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLK1P49759 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLK1P49759 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.21□□□□□ -0.14
CLK1P49759 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
CLK1P49759 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLK1P49759 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.2□□□□□ -0.14
CLK1P49759 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLK1P49759 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLK1P49759 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLK1P49759 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CLK1P49759 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLK1P49759 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.2□□□□□ -0.14
CLK1P49759 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLK1P49759 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLK1P49759 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLK1P49759 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLK1P49759 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CLK1P49759 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.2□□□□□ -0.14
CLK1P49759 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CLK1P49759 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLK1P49759 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.2□□□□□ -0.14
CLK1P49759 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CLK1P49759 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLK1P49759 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CLK1P49759 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.2□□□□□ -0.14
CLK1P49759 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLK1P49759 TOMM22P5-201ENST00000416399 439 ntBASIC14.2□□□□□ -0.14
CLK1P49759 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.2□□□□□ -0.14
CLK1P49759 AC114501.2-201ENST00000439631 535 ntBASIC14.2□□□□□ -0.14
CLK1P49759 RPL13P2-201ENST00000440687 659 ntBASIC14.2□□□□□ -0.14
CLK1P49759 AC004890.2-204ENST00000481968 304 ntBASIC14.2□□□□□ -0.14
CLK1P49759 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.2□□□□□ -0.14
CLK1P49759 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.2□□□□□ -0.14
CLK1P49759 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.2□□□□□ -0.14
CLK1P49759 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.2□□□□□ -0.14
CLK1P49759 AL390754.1-201ENST00000619088 582 ntBASIC14.2□□□□□ -0.14
CLK1P49759 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CLK1P49759 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CLK1P49759 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
CLK1P49759 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CLK1P49759 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLK1P49759 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.2□□□□□ -0.14
CLK1P49759 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CLK1P49759 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLK1P49759 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLK1P49759 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.2□□□□□ -0.14
CLK1P49759 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CLK1P49759 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CLK1P49759 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.2□□□□□ -0.14
CLK1P49759 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CLK1P49759 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.2□□□□□ -0.14
CLK1P49759 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLK1P49759 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLK1P49759 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLK1P49759 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLK1P49759 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.19□□□□□ -0.14
CLK1P49759 REXO1L2P-201ENST00000425429 2069 ntBASIC14.19□□□□□ -0.14
CLK1P49759 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.19□□□□□ -0.14
CLK1P49759 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CLK1P49759 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLK1P49759 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CLK1P49759 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CLK1P49759 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
CLK1P49759 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLK1P49759 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLK1P49759 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.19□□□□□ -0.14
CLK1P49759 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.19□□□□□ -0.14
CLK1P49759 AC022144.1-201ENST00000602255 1580 ntBASIC14.19□□□□□ -0.14
CLK1P49759 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLK1P49759 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLK1P49759 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLK1P49759 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
CLK1P49759 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLK1P49759 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLK1P49759 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLK1P49759 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLK1P49759 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLK1P49759 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.19□□□□□ -0.14
CLK1P49759 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.19□□□□□ -0.14
CLK1P49759 AC015922.1-201ENST00000421102 1152 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms