Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 AC018529.2-202ENST00000611482 3087 ntBASIC13.02□□□□□ -0.33
CBX5P45973 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.02□□□□□ -0.33
CBX5P45973 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.02□□□□□ -0.33
CBX5P45973 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CBX5P45973 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.01□□□□□ -0.33
CBX5P45973 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
CBX5P45973 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CBX5P45973 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CBX5P45973 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CBX5P45973 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.01□□□□□ -0.33
CBX5P45973 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.01□□□□□ -0.33
CBX5P45973 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.01□□□□□ -0.33
CBX5P45973 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC13.01□□□□□ -0.33
CBX5P45973 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CBX5P45973 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CBX5P45973 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
CBX5P45973 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CBX5P45973 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CBX5P45973 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CBX5P45973 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CBX5P45973 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CBX5P45973 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CBX5P45973 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CBX5P45973 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CBX5P45973 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CBX5P45973 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.01□□□□□ -0.33
CBX5P45973 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CBX5P45973 AL133267.1-201ENST00000398220 340 ntBASIC13.01□□□□□ -0.33
CBX5P45973 AC104457.1-201ENST00000401024 814 ntBASIC13.01□□□□□ -0.33
CBX5P45973 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.01□□□□□ -0.33
CBX5P45973 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.01□□□□□ -0.33
CBX5P45973 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CBX5P45973 TPT1P11-201ENST00000458482 498 ntBASIC13.01□□□□□ -0.33
CBX5P45973 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.01□□□□□ -0.33
CBX5P45973 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CBX5P45973 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC13.01□□□□□ -0.33
CBX5P45973 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.01□□□□□ -0.33
CBX5P45973 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.01□□□□□ -0.33
CBX5P45973 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.01□□□□□ -0.33
CBX5P45973 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.01□□□□□ -0.33
CBX5P45973 AC243562.1-201ENST00000560672 389 ntBASIC13.01□□□□□ -0.33
CBX5P45973 AC034105.1-201ENST00000563488 319 ntBASIC13.01□□□□□ -0.33
CBX5P45973 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.01□□□□□ -0.33
CBX5P45973 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CBX5P45973 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.01□□□□□ -0.33
CBX5P45973 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.01□□□□□ -0.33
CBX5P45973 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.01□□□□□ -0.33
CBX5P45973 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CBX5P45973 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CBX5P45973 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CBX5P45973 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
CBX5P45973 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CBX5P45973 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CBX5P45973 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CBX5P45973 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.01□□□□□ -0.33
CBX5P45973 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CBX5P45973 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CBX5P45973 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CBX5P45973 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.01□□□□□ -0.33
CBX5P45973 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.01□□□□□ -0.33
CBX5P45973 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.01□□□□□ -0.33
CBX5P45973 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.01□□□□□ -0.33
CBX5P45973 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CBX5P45973 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CBX5P45973 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CBX5P45973 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CBX5P45973 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
CBX5P45973 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.01□□□□□ -0.33
CBX5P45973 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.01□□□□□ -0.33
CBX5P45973 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.01□□□□□ -0.33
CBX5P45973 NUTM2HP-201ENST00000442076 2498 ntBASIC13.01□□□□□ -0.33
CBX5P45973 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CBX5P45973 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CBX5P45973 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CBX5P45973 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CBX5P45973 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC13.01□□□□□ -0.33
CBX5P45973 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CBX5P45973 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
CBX5P45973 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CBX5P45973 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13□□□□□ -0.33
CBX5P45973 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13□□□□□ -0.33
CBX5P45973 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
CBX5P45973 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CBX5P45973 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13□□□□□ -0.33
CBX5P45973 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13□□□□□ -0.33
CBX5P45973 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CBX5P45973 AC152010.1-201ENST00000415779 2006 ntBASIC13□□□□□ -0.33
CBX5P45973 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC13□□□□□ -0.33
CBX5P45973 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CBX5P45973 REXO1L4P-201ENST00000605109 1937 ntBASIC13□□□□□ -0.33
CBX5P45973 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
CBX5P45973 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13□□□□□ -0.33
CBX5P45973 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13□□□□□ -0.33
CBX5P45973 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CBX5P45973 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13□□□□□ -0.33
CBX5P45973 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CBX5P45973 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13□□□□□ -0.33
CBX5P45973 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13□□□□□ -0.33
CBX5P45973 AC104109.2-201ENST00000602919 1418 ntBASIC13□□□□□ -0.33
CBX5P45973 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms