Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
COPB2P35606 VPS18-202ENST00000558474 873 ntTSL 3 BASIC17.06■□□□□ 0.32
COPB2P35606 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC17.06■□□□□ 0.32
COPB2P35606 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COPB2P35606 MIR3907-201ENST00000579424 151 ntBASIC17.06■□□□□ 0.32
COPB2P35606 CENPX-208ENST00000584347 799 ntTSL 2 BASIC17.06■□□□□ 0.32
COPB2P35606 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
COPB2P35606 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.06■□□□□ 0.32
COPB2P35606 AC128714.1-201ENST00000637035 887 ntBASIC17.06■□□□□ 0.32
COPB2P35606 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COPB2P35606 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.06■□□□□ 0.32
COPB2P35606 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COPB2P35606 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.06■□□□□ 0.32
COPB2P35606 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
COPB2P35606 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COPB2P35606 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COPB2P35606 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
COPB2P35606 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.06■□□□□ 0.32
COPB2P35606 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
COPB2P35606 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.05■□□□□ 0.32
COPB2P35606 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COPB2P35606 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COPB2P35606 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COPB2P35606 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.05■□□□□ 0.32
COPB2P35606 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
COPB2P35606 AC244394.1-201ENST00000435000 1665 ntBASIC17.05■□□□□ 0.32
COPB2P35606 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COPB2P35606 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COPB2P35606 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
COPB2P35606 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC17.05■□□□□ 0.32
COPB2P35606 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COPB2P35606 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
COPB2P35606 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
COPB2P35606 VDAC1P1-201ENST00000439229 848 ntBASIC17.05■□□□□ 0.32
COPB2P35606 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC17.05■□□□□ 0.32
COPB2P35606 AL596276.2-201ENST00000447525 331 ntBASIC17.05■□□□□ 0.32
COPB2P35606 RCC2P8-201ENST00000502779 1035 ntBASIC17.05■□□□□ 0.32
COPB2P35606 AC134698.3-201ENST00000523880 214 ntBASIC17.05■□□□□ 0.32
COPB2P35606 CCNC-217ENST00000523985 958 ntTSL 2 BASIC17.05■□□□□ 0.32
COPB2P35606 AL160314.3-201ENST00000556041 767 ntBASIC17.05■□□□□ 0.32
COPB2P35606 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.05■□□□□ 0.32
COPB2P35606 AC008805.1-201ENST00000590892 364 ntBASIC17.05■□□□□ 0.32
COPB2P35606 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
COPB2P35606 AL353770.1-201ENST00000614915 403 ntBASIC17.05■□□□□ 0.32
COPB2P35606 AC079336.7-201ENST00000623428 1078 ntBASIC17.05■□□□□ 0.32
COPB2P35606 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COPB2P35606 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COPB2P35606 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
COPB2P35606 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COPB2P35606 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COPB2P35606 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COPB2P35606 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COPB2P35606 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COPB2P35606 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COPB2P35606 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COPB2P35606 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
COPB2P35606 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.05■□□□□ 0.32
COPB2P35606 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
COPB2P35606 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
COPB2P35606 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
COPB2P35606 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COPB2P35606 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.04■□□□□ 0.32
COPB2P35606 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COPB2P35606 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.04■□□□□ 0.32
COPB2P35606 WASH3P-207ENST00000560956 1394 ntBASIC17.04■□□□□ 0.32
COPB2P35606 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COPB2P35606 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
COPB2P35606 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
COPB2P35606 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
COPB2P35606 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COPB2P35606 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
COPB2P35606 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COPB2P35606 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COPB2P35606 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.04■□□□□ 0.32
COPB2P35606 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COPB2P35606 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COPB2P35606 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC17.04■□□□□ 0.32
COPB2P35606 FTLP1-201ENST00000449155 526 ntBASIC17.04■□□□□ 0.32
COPB2P35606 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
COPB2P35606 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.04■□□□□ 0.32
COPB2P35606 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
COPB2P35606 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.04■□□□□ 0.32
COPB2P35606 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COPB2P35606 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.04■□□□□ 0.32
COPB2P35606 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC17.04■□□□□ 0.32
COPB2P35606 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COPB2P35606 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
COPB2P35606 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
COPB2P35606 AC126365.1-201ENST00000578585 1514 ntBASIC17.04■□□□□ 0.32
COPB2P35606 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
COPB2P35606 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
COPB2P35606 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
COPB2P35606 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COPB2P35606 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COPB2P35606 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.04■□□□□ 0.32
COPB2P35606 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
COPB2P35606 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.04■□□□□ 0.32
COPB2P35606 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COPB2P35606 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
COPB2P35606 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms