Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
USP6P35125 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC19.79■□□□□ 0.76
USP6P35125 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP6P35125 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC19.79■□□□□ 0.76
USP6P35125 AC018463.1-201ENST00000456674 917 ntBASIC19.79■□□□□ 0.76
USP6P35125 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP6P35125 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
USP6P35125 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC19.79■□□□□ 0.76
USP6P35125 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC19.79■□□□□ 0.76
USP6P35125 AL161773.1-201ENST00000624845 863 ntBASIC19.79■□□□□ 0.76
USP6P35125 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
USP6P35125 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
USP6P35125 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC19.79■□□□□ 0.76
USP6P35125 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC19.79■□□□□ 0.76
USP6P35125 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
USP6P35125 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
USP6P35125 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.79■□□□□ 0.76
USP6P35125 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP6P35125 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP6P35125 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
USP6P35125 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP6P35125 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP6P35125 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP6P35125 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP6P35125 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC19.79■□□□□ 0.76
USP6P35125 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP6P35125 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP6P35125 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP6P35125 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP6P35125 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC19.79■□□□□ 0.76
USP6P35125 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
USP6P35125 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP6P35125 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
USP6P35125 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP6P35125 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC19.78■□□□□ 0.76
USP6P35125 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP6P35125 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP6P35125 HIST2H2BA-201ENST00000412169 381 ntBASIC19.78■□□□□ 0.76
USP6P35125 KRT18P66-201ENST00000452970 1269 ntBASIC19.78■□□□□ 0.76
USP6P35125 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP6P35125 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
USP6P35125 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
USP6P35125 AC090386.2-201ENST00000623010 1039 ntBASIC19.78■□□□□ 0.76
USP6P35125 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP6P35125 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP6P35125 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
USP6P35125 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP6P35125 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC19.78■□□□□ 0.76
USP6P35125 AC025271.4-201ENST00000621477 1726 ntBASIC19.78■□□□□ 0.76
USP6P35125 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
USP6P35125 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP6P35125 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
USP6P35125 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC19.78■□□□□ 0.76
USP6P35125 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP6P35125 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP6P35125 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP6P35125 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
USP6P35125 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.78■□□□□ 0.76
USP6P35125 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
USP6P35125 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP6P35125 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
USP6P35125 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP6P35125 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC19.77■□□□□ 0.76
USP6P35125 MIR645-201ENST00000385283 94 ntBASIC19.77■□□□□ 0.76
USP6P35125 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP6P35125 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC19.77■□□□□ 0.76
USP6P35125 OR8T1P-201ENST00000421347 918 ntBASIC19.77■□□□□ 0.76
USP6P35125 LYPLA2P1-203ENST00000447689 696 ntBASIC19.77■□□□□ 0.76
USP6P35125 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC19.77■□□□□ 0.76
USP6P35125 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
USP6P35125 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC19.77■□□□□ 0.76
USP6P35125 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP6P35125 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC19.77■□□□□ 0.76
USP6P35125 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.76
USP6P35125 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC19.77■□□□□ 0.76
USP6P35125 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP6P35125 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC19.77■□□□□ 0.76
USP6P35125 AC090502.4-201ENST00000551714 1386 ntBASIC19.77■□□□□ 0.76
USP6P35125 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
USP6P35125 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC19.77■□□□□ 0.76
USP6P35125 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC19.77■□□□□ 0.76
USP6P35125 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
USP6P35125 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
USP6P35125 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
USP6P35125 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP6P35125 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
USP6P35125 HCG11-201ENST00000411553 5696 ntBASIC19.77■□□□□ 0.75
USP6P35125 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
USP6P35125 CYP51A1P3-201ENST00000400072 1428 ntBASIC19.77■□□□□ 0.75
USP6P35125 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
USP6P35125 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.77■□□□□ 0.75
USP6P35125 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP6P35125 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC19.76■□□□□ 0.75
USP6P35125 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC19.76■□□□□ 0.75
USP6P35125 NUDT4P2-201ENST00000578341 546 ntBASIC19.76■□□□□ 0.75
USP6P35125 CICP6-201ENST00000457191 2729 ntBASIC19.76■□□□□ 0.75
USP6P35125 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
USP6P35125 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP6P35125 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.76■□□□□ 0.75
USP6P35125 AC015688.4-201ENST00000580780 1647 ntBASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms