Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC20.52■□□□□ 0.88
CPS1P31327 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPS1P31327 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPS1P31327 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CPS1P31327 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CPS1P31327 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPS1P31327 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC20.52■□□□□ 0.88
CPS1P31327 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC20.52■□□□□ 0.88
CPS1P31327 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC20.52■□□□□ 0.88
CPS1P31327 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
CPS1P31327 JTB-202ENST00000356648 1040 ntTSL 2 BASIC20.52■□□□□ 0.87
CPS1P31327 AC098934.1-203ENST00000442868 1262 ntBASIC20.52■□□□□ 0.87
CPS1P31327 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC20.52■□□□□ 0.87
CPS1P31327 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC20.52■□□□□ 0.87
CPS1P31327 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC20.52■□□□□ 0.87
CPS1P31327 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CPS1P31327 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CPS1P31327 AC006372.4-201ENST00000624122 1543 ntBASIC20.52■□□□□ 0.87
CPS1P31327 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.87
CPS1P31327 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC20.51■□□□□ 0.87
CPS1P31327 FUCA1P1-201ENST00000374476 1351 ntBASIC20.51■□□□□ 0.87
CPS1P31327 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CPS1P31327 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
CPS1P31327 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPS1P31327 AC009093.10-201ENST00000641956 1442 ntBASIC20.51■□□□□ 0.87
CPS1P31327 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPS1P31327 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CPS1P31327 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPS1P31327 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.51■□□□□ 0.87
CPS1P31327 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CPS1P31327 TMBIM7P-203ENST00000641617 1718 ntBASIC20.51■□□□□ 0.87
CPS1P31327 PCDHGB8P-201ENST00000502926 1973 ntBASIC20.51■□□□□ 0.87
CPS1P31327 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPS1P31327 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPS1P31327 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CPS1P31327 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CPS1P31327 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CPS1P31327 EEF1DP5-201ENST00000431410 772 ntBASIC20.51■□□□□ 0.87
CPS1P31327 VENTXP4-201ENST00000449029 958 ntBASIC20.51■□□□□ 0.87
CPS1P31327 RPS18P9-201ENST00000482817 460 ntBASIC20.51■□□□□ 0.87
CPS1P31327 AC008026.2-201ENST00000495438 348 ntBASIC20.51■□□□□ 0.87
CPS1P31327 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CPS1P31327 FOXN3-AS2-201ENST00000554071 1262 ntBASIC20.51■□□□□ 0.87
CPS1P31327 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC20.51■□□□□ 0.87
CPS1P31327 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC20.51■□□□□ 0.87
CPS1P31327 MIR6125-201ENST00000618986 96 ntBASIC20.51■□□□□ 0.87
CPS1P31327 HELLS-212ENST00000630929 400 ntTSL 5 BASIC20.51■□□□□ 0.87
CPS1P31327 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CPS1P31327 R3HDM2P2-201ENST00000401880 2116 ntBASIC20.51■□□□□ 0.87
CPS1P31327 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPS1P31327 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CPS1P31327 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC20.51■□□□□ 0.87
CPS1P31327 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPS1P31327 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPS1P31327 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC20.51■□□□□ 0.87
CPS1P31327 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPS1P31327 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPS1P31327 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPS1P31327 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPS1P31327 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
CPS1P31327 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.5■□□□□ 0.87
CPS1P31327 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPS1P31327 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPS1P31327 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CPS1P31327 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC20.5■□□□□ 0.87
CPS1P31327 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CPS1P31327 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC20.5■□□□□ 0.87
CPS1P31327 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CPS1P31327 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPS1P31327 RNVU1-8-201ENST00000364272 125 ntBASIC20.5■□□□□ 0.87
CPS1P31327 ST13P19-201ENST00000442505 1124 ntBASIC20.5■□□□□ 0.87
CPS1P31327 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC20.5■□□□□ 0.87
CPS1P31327 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC20.5■□□□□ 0.87
CPS1P31327 AC090136.2-201ENST00000517809 420 ntBASIC20.5■□□□□ 0.87
CPS1P31327 IGHV1-12-201ENST00000518307 205 ntBASIC20.5■□□□□ 0.87
CPS1P31327 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC20.5■□□□□ 0.87
CPS1P31327 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC20.5■□□□□ 0.87
CPS1P31327 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC20.5■□□□□ 0.87
CPS1P31327 AL160191.2-201ENST00000603975 601 ntBASIC20.5■□□□□ 0.87
CPS1P31327 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC20.5■□□□□ 0.87
CPS1P31327 HLA-DQB2-231ENST00000435145 2026 ntBASIC20.5■□□□□ 0.87
CPS1P31327 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CPS1P31327 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPS1P31327 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC20.5■□□□□ 0.87
CPS1P31327 KHSRPP1-201ENST00000427983 1768 ntBASIC20.5■□□□□ 0.87
CPS1P31327 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC20.5■□□□□ 0.87
CPS1P31327 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CPS1P31327 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPS1P31327 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPS1P31327 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC20.5■□□□□ 0.87
CPS1P31327 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC20.5■□□□□ 0.87
CPS1P31327 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CPS1P31327 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPS1P31327 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPS1P31327 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPS1P31327 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPS1P31327 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.49■□□□□ 0.87
CPS1P31327 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPS1P31327 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC20.49■□□□□ 0.87
CPS1P31327 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms