Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PTPN6P29350 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTPN6P29350 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PTPN6P29350 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTPN6P29350 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTPN6P29350 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
PTPN6P29350 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTPN6P29350 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.25□□□□□ -0.13
PTPN6P29350 BEND3P1-201ENST00000421591 1944 ntBASIC14.25□□□□□ -0.13
PTPN6P29350 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTPN6P29350 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
PTPN6P29350 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.25□□□□□ -0.13
PTPN6P29350 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTPN6P29350 SBF1P1-201ENST00000444527 5631 ntBASIC14.25□□□□□ -0.13
PTPN6P29350 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PTPN6P29350 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTPN6P29350 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PTPN6P29350 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTPN6P29350 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PTPN6P29350 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PTPN6P29350 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PTPN6P29350 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PTPN6P29350 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.24□□□□□ -0.13
PTPN6P29350 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PTPN6P29350 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.24□□□□□ -0.13
PTPN6P29350 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PTPN6P29350 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
PTPN6P29350 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PTPN6P29350 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PTPN6P29350 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.24□□□□□ -0.13
PTPN6P29350 AC098614.1-201ENST00000368528 745 ntBASIC14.24□□□□□ -0.13
PTPN6P29350 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PTPN6P29350 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.24□□□□□ -0.13
PTPN6P29350 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PTPN6P29350 AP006294.1-201ENST00000415407 339 ntBASIC14.24□□□□□ -0.13
PTPN6P29350 COX5BP8-201ENST00000416911 349 ntBASIC14.24□□□□□ -0.13
PTPN6P29350 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.24□□□□□ -0.13
PTPN6P29350 FAM86LP-201ENST00000478302 853 ntBASIC14.24□□□□□ -0.13
PTPN6P29350 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.24□□□□□ -0.13
PTPN6P29350 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.24□□□□□ -0.13
PTPN6P29350 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.24□□□□□ -0.13
PTPN6P29350 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
PTPN6P29350 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.24□□□□□ -0.13
PTPN6P29350 DUX4L47-201ENST00000566374 394 ntBASIC14.24□□□□□ -0.13
PTPN6P29350 CTBP2P3-201ENST00000585629 1255 ntBASIC14.24□□□□□ -0.13
PTPN6P29350 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.24□□□□□ -0.13
PTPN6P29350 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.24□□□□□ -0.13
PTPN6P29350 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.24□□□□□ -0.13
PTPN6P29350 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.24□□□□□ -0.13
PTPN6P29350 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PTPN6P29350 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PTPN6P29350 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PTPN6P29350 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PTPN6P29350 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PTPN6P29350 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PTPN6P29350 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PTPN6P29350 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.24□□□□□ -0.13
PTPN6P29350 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PTPN6P29350 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PTPN6P29350 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PTPN6P29350 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
PTPN6P29350 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.24□□□□□ -0.13
PTPN6P29350 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
PTPN6P29350 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PTPN6P29350 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PTPN6P29350 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.23□□□□□ -0.13
PTPN6P29350 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PTPN6P29350 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.23□□□□□ -0.13
PTPN6P29350 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PTPN6P29350 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PTPN6P29350 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
PTPN6P29350 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PTPN6P29350 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PTPN6P29350 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
PTPN6P29350 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PTPN6P29350 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.23□□□□□ -0.13
PTPN6P29350 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PTPN6P29350 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PTPN6P29350 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PTPN6P29350 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PTPN6P29350 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
PTPN6P29350 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PTPN6P29350 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PTPN6P29350 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PTPN6P29350 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PTPN6P29350 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
PTPN6P29350 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PTPN6P29350 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PTPN6P29350 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.23□□□□□ -0.13
PTPN6P29350 NME2P1-201ENST00000426182 414 ntBASIC14.23□□□□□ -0.13
PTPN6P29350 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.23□□□□□ -0.13
PTPN6P29350 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.23□□□□□ -0.13
PTPN6P29350 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.23□□□□□ -0.13
PTPN6P29350 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.23□□□□□ -0.13
PTPN6P29350 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.23□□□□□ -0.13
PTPN6P29350 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.23□□□□□ -0.13
PTPN6P29350 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PTPN6P29350 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PTPN6P29350 AC092552.1-201ENST00000547243 906 ntBASIC14.23□□□□□ -0.13
PTPN6P29350 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms