Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ABCD3P28288 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ABCD3P28288 AC106820.3-201ENST00000561653 397 ntBASIC13.83□□□□□ -0.2
ABCD3P28288 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.83□□□□□ -0.2
ABCD3P28288 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.83□□□□□ -0.2
ABCD3P28288 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ABCD3P28288 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.83□□□□□ -0.2
ABCD3P28288 FKBP4P6-201ENST00000457486 1332 ntBASIC13.83□□□□□ -0.2
ABCD3P28288 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.83□□□□□ -0.2
ABCD3P28288 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
ABCD3P28288 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
ABCD3P28288 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.83□□□□□ -0.2
ABCD3P28288 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
ABCD3P28288 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ABCD3P28288 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ABCD3P28288 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ABCD3P28288 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ABCD3P28288 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ABCD3P28288 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.82□□□□□ -0.2
ABCD3P28288 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.82□□□□□ -0.2
ABCD3P28288 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
ABCD3P28288 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ABCD3P28288 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
ABCD3P28288 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.82□□□□□ -0.2
ABCD3P28288 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.82□□□□□ -0.2
ABCD3P28288 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ABCD3P28288 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.82□□□□□ -0.2
ABCD3P28288 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.82□□□□□ -0.2
ABCD3P28288 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ABCD3P28288 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
ABCD3P28288 AC003102.2-201ENST00000589195 1469 ntBASIC13.82□□□□□ -0.2
ABCD3P28288 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.82□□□□□ -0.2
ABCD3P28288 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.82□□□□□ -0.2
ABCD3P28288 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ABCD3P28288 SALL4P5-201ENST00000419001 1760 ntBASIC13.82□□□□□ -0.2
ABCD3P28288 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ABCD3P28288 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ABCD3P28288 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.82□□□□□ -0.2
ABCD3P28288 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.82□□□□□ -0.2
ABCD3P28288 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ABCD3P28288 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.82□□□□□ -0.2
ABCD3P28288 CSF2RBP1-201ENST00000447905 391 ntBASIC13.82□□□□□ -0.2
ABCD3P28288 AL391280.1-201ENST00000506969 1062 ntBASIC13.82□□□□□ -0.2
ABCD3P28288 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.82□□□□□ -0.2
ABCD3P28288 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.82□□□□□ -0.2
ABCD3P28288 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.82□□□□□ -0.2
ABCD3P28288 MIR4259-201ENST00000584466 101 ntBASIC13.82□□□□□ -0.2
ABCD3P28288 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
ABCD3P28288 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.82□□□□□ -0.2
ABCD3P28288 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ABCD3P28288 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.82□□□□□ -0.2
ABCD3P28288 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.82□□□□□ -0.2
ABCD3P28288 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.82□□□□□ -0.2
ABCD3P28288 OR10B1P-201ENST00000601666 907 ntBASIC13.82□□□□□ -0.2
ABCD3P28288 AC138696.2-201ENST00000607376 223 ntBASIC13.82□□□□□ -0.2
ABCD3P28288 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ABCD3P28288 AC008687.7-202ENST00000637404 953 ntBASIC13.82□□□□□ -0.2
ABCD3P28288 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.82□□□□□ -0.2
ABCD3P28288 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ABCD3P28288 AC018442.1-201ENST00000421439 2061 ntBASIC13.82□□□□□ -0.2
ABCD3P28288 AL138725.1-201ENST00000407347 1314 ntBASIC13.82□□□□□ -0.2
ABCD3P28288 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ABCD3P28288 LINC01101-201ENST00000622953 1884 ntBASIC13.82□□□□□ -0.2
ABCD3P28288 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ABCD3P28288 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.82□□□□□ -0.2
ABCD3P28288 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.82□□□□□ -0.2
ABCD3P28288 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ABCD3P28288 AC018529.2-202ENST00000611482 3087 ntBASIC13.82□□□□□ -0.2
ABCD3P28288 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ABCD3P28288 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.82□□□□□ -0.2
ABCD3P28288 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.82□□□□□ -0.2
ABCD3P28288 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
ABCD3P28288 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.81□□□□□ -0.2
ABCD3P28288 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ABCD3P28288 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ABCD3P28288 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.81□□□□□ -0.2
ABCD3P28288 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.81□□□□□ -0.2
ABCD3P28288 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.81□□□□□ -0.2
ABCD3P28288 AC011840.2-201ENST00000563063 1520 ntBASIC13.81□□□□□ -0.2
ABCD3P28288 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ABCD3P28288 INE2-201ENST00000630399 1874 ntBASIC13.81□□□□□ -0.2
ABCD3P28288 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
ABCD3P28288 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ABCD3P28288 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.81□□□□□ -0.2
ABCD3P28288 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.81□□□□□ -0.2
ABCD3P28288 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ABCD3P28288 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ABCD3P28288 AC099336.1-201ENST00000417053 1171 ntBASIC13.81□□□□□ -0.2
ABCD3P28288 HLA-V-201ENST00000429037 534 ntBASIC13.81□□□□□ -0.2
ABCD3P28288 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
ABCD3P28288 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.81□□□□□ -0.2
ABCD3P28288 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.81□□□□□ -0.2
ABCD3P28288 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
ABCD3P28288 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ABCD3P28288 AC023310.1-201ENST00000554836 735 ntBASIC13.81□□□□□ -0.2
ABCD3P28288 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.81□□□□□ -0.2
ABCD3P28288 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
ABCD3P28288 AL359881.2-201ENST00000602973 570 ntBASIC13.81□□□□□ -0.2
ABCD3P28288 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ABCD3P28288 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms