Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
VARSP26640 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VARSP26640 AC099521.3-201ENST00000624251 2938 ntBASIC14.85□□□□□ -0.03
VARSP26640 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VARSP26640 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VARSP26640 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VARSP26640 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VARSP26640 BOLA2P3-201ENST00000404566 256 ntBASIC14.85□□□□□ -0.03
VARSP26640 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.85□□□□□ -0.03
VARSP26640 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.85□□□□□ -0.03
VARSP26640 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
VARSP26640 VDAC1P7-201ENST00000462417 847 ntBASIC14.85□□□□□ -0.03
VARSP26640 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VARSP26640 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.85□□□□□ -0.03
VARSP26640 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
VARSP26640 ETFRF1-205ENST00000555711 783 ntTSL 3 BASIC14.85□□□□□ -0.03
VARSP26640 AP005482.1-201ENST00000563722 1273 ntBASIC14.85□□□□□ -0.03
VARSP26640 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.85□□□□□ -0.03
VARSP26640 AL049840.4-201ENST00000602422 811 ntBASIC14.85□□□□□ -0.03
VARSP26640 IGHV3-72-202ENST00000621503 303 ntBASIC14.85□□□□□ -0.03
VARSP26640 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.85□□□□□ -0.03
VARSP26640 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VARSP26640 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
VARSP26640 REXO1L4P-201ENST00000605109 1937 ntBASIC14.85□□□□□ -0.03
VARSP26640 AC027612.1-201ENST00000445234 2395 ntBASIC14.85□□□□□ -0.03
VARSP26640 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VARSP26640 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
VARSP26640 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
VARSP26640 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
VARSP26640 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VARSP26640 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VARSP26640 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.85□□□□□ -0.03
VARSP26640 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
VARSP26640 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VARSP26640 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VARSP26640 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
VARSP26640 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VARSP26640 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VARSP26640 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VARSP26640 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VARSP26640 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VARSP26640 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VARSP26640 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VARSP26640 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VARSP26640 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VARSP26640 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VARSP26640 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
VARSP26640 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.84□□□□□ -0.03
VARSP26640 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VARSP26640 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VARSP26640 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VARSP26640 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.84□□□□□ -0.03
VARSP26640 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
VARSP26640 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VARSP26640 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.84□□□□□ -0.03
VARSP26640 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
VARSP26640 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VARSP26640 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VARSP26640 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
VARSP26640 MIR1909-201ENST00000411312 80 ntBASIC14.84□□□□□ -0.03
VARSP26640 GAPDHP40-201ENST00000505218 1006 ntBASIC14.84□□□□□ -0.03
VARSP26640 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
VARSP26640 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.84□□□□□ -0.03
VARSP26640 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.84□□□□□ -0.03
VARSP26640 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VARSP26640 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.84□□□□□ -0.03
VARSP26640 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.84□□□□□ -0.03
VARSP26640 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.84□□□□□ -0.03
VARSP26640 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.84□□□□□ -0.03
VARSP26640 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.84□□□□□ -0.03
VARSP26640 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.84□□□□□ -0.03
VARSP26640 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.84□□□□□ -0.03
VARSP26640 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.84□□□□□ -0.03
VARSP26640 AL645728.2-202ENST00000641679 227 ntBASIC14.84□□□□□ -0.03
VARSP26640 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VARSP26640 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VARSP26640 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
VARSP26640 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VARSP26640 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
VARSP26640 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
VARSP26640 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VARSP26640 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VARSP26640 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.84□□□□□ -0.03
VARSP26640 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
VARSP26640 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VARSP26640 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VARSP26640 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VARSP26640 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
VARSP26640 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VARSP26640 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VARSP26640 OR2I1P-209ENST00000641730 5365 ntBASIC14.84□□□□□ -0.03
VARSP26640 DRD5P1-201ENST00000456605 1438 ntBASIC14.83□□□□□ -0.03
VARSP26640 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
VARSP26640 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
VARSP26640 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
VARSP26640 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
VARSP26640 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.83□□□□□ -0.04
VARSP26640 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VARSP26640 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VARSP26640 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms