Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TOP2AP11388 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC25.36■■□□□ 1.65
TOP2AP11388 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC25.36■■□□□ 1.65
TOP2AP11388 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC25.36■■□□□ 1.65
TOP2AP11388 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC25.36■■□□□ 1.65
TOP2AP11388 AQP7P3-201ENST00000624547 1041 ntBASIC25.36■■□□□ 1.65
TOP2AP11388 ST5-261ENST00000626808 1071 ntTSL 5 BASIC25.36■■□□□ 1.65
TOP2AP11388 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC25.36■■□□□ 1.65
TOP2AP11388 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC25.36■■□□□ 1.65
TOP2AP11388 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
TOP2AP11388 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC25.36■■□□□ 1.65
TOP2AP11388 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TOP2AP11388 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
TOP2AP11388 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
TOP2AP11388 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC25.35■■□□□ 1.65
TOP2AP11388 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC25.35■■□□□ 1.65
TOP2AP11388 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TOP2AP11388 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
TOP2AP11388 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
TOP2AP11388 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TOP2AP11388 PARN-202ENST00000420015 2360 ntTSL 2 BASIC25.35■■□□□ 1.65
TOP2AP11388 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
TOP2AP11388 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
TOP2AP11388 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC25.35■■□□□ 1.65
TOP2AP11388 GNG10P1-201ENST00000452289 199 ntBASIC25.35■■□□□ 1.65
TOP2AP11388 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
TOP2AP11388 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC25.35■■□□□ 1.65
TOP2AP11388 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC25.35■■□□□ 1.65
TOP2AP11388 AC226150.1-201ENST00000544259 466 ntBASIC25.35■■□□□ 1.65
TOP2AP11388 MT2A-202ENST00000561491 581 ntTSL 2 BASIC25.35■■□□□ 1.65
TOP2AP11388 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC25.35■■□□□ 1.65
TOP2AP11388 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC25.35■■□□□ 1.65
TOP2AP11388 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TOP2AP11388 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC25.35■■□□□ 1.65
TOP2AP11388 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TOP2AP11388 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
TOP2AP11388 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC25.34■■□□□ 1.65
TOP2AP11388 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TOP2AP11388 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TOP2AP11388 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TOP2AP11388 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
TOP2AP11388 RPL3P2-204ENST00000413027 1203 ntBASIC25.34■■□□□ 1.65
TOP2AP11388 ACTG1P19-201ENST00000418987 1116 ntBASIC25.34■■□□□ 1.65
TOP2AP11388 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC25.34■■□□□ 1.65
TOP2AP11388 USB1-205ENST00000561743 1135 ntTSL 3 BASIC25.34■■□□□ 1.65
TOP2AP11388 AC005586.2-201ENST00000563946 837 ntBASIC25.34■■□□□ 1.65
TOP2AP11388 THY1-209ENST00000580275 578 ntTSL 3 BASIC25.34■■□□□ 1.65
TOP2AP11388 LINC00244-201ENST00000625073 613 ntBASIC25.34■■□□□ 1.65
TOP2AP11388 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC25.34■■□□□ 1.65
TOP2AP11388 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC25.34■■□□□ 1.65
TOP2AP11388 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC25.34■■□□□ 1.65
TOP2AP11388 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC25.34■■□□□ 1.65
TOP2AP11388 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
TOP2AP11388 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
TOP2AP11388 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
TOP2AP11388 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
TOP2AP11388 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TOP2AP11388 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
TOP2AP11388 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC25.34■■□□□ 1.65
TOP2AP11388 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
TOP2AP11388 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC25.34■■□□□ 1.65
TOP2AP11388 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TOP2AP11388 PGR-210ENST00000619228 3038 ntTSL 5 BASIC25.33■■□□□ 1.65
TOP2AP11388 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TOP2AP11388 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
TOP2AP11388 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC25.33■■□□□ 1.65
TOP2AP11388 AC106047.2-201ENST00000511723 743 ntBASIC25.33■■□□□ 1.65
TOP2AP11388 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC25.33■■□□□ 1.65
TOP2AP11388 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC25.33■■□□□ 1.65
TOP2AP11388 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TOP2AP11388 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TOP2AP11388 CCT8L1P-201ENST00000465400 1674 ntBASIC25.33■■□□□ 1.65
TOP2AP11388 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
TOP2AP11388 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
TOP2AP11388 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
TOP2AP11388 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
TOP2AP11388 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TOP2AP11388 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
TOP2AP11388 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
TOP2AP11388 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.64
TOP2AP11388 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
TOP2AP11388 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC25.33■■□□□ 1.64
TOP2AP11388 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
TOP2AP11388 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC25.32■■□□□ 1.64
TOP2AP11388 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TOP2AP11388 KRT18P46-201ENST00000435568 1279 ntBASIC25.32■■□□□ 1.64
TOP2AP11388 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC25.32■■□□□ 1.64
TOP2AP11388 AC025186.1-201ENST00000478174 870 ntBASIC25.32■■□□□ 1.64
TOP2AP11388 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
TOP2AP11388 TRMT112P3-201ENST00000580149 358 ntBASIC25.32■■□□□ 1.64
TOP2AP11388 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
TOP2AP11388 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
TOP2AP11388 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC25.32■■□□□ 1.64
TOP2AP11388 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
TOP2AP11388 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC25.32■■□□□ 1.64
TOP2AP11388 AC018442.1-201ENST00000421439 2061 ntBASIC25.32■■□□□ 1.64
TOP2AP11388 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
TOP2AP11388 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC25.32■■□□□ 1.64
TOP2AP11388 CTBP2P8-201ENST00000422584 1330 ntBASIC25.32■■□□□ 1.64
TOP2AP11388 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms