Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.62■□□□□ 0.41
TOP1P11387 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TOP1P11387 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.62■□□□□ 0.41
TOP1P11387 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TOP1P11387 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TOP1P11387 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TOP1P11387 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TOP1P11387 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.62■□□□□ 0.41
TOP1P11387 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.62■□□□□ 0.41
TOP1P11387 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TOP1P11387 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.62■□□□□ 0.41
TOP1P11387 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TOP1P11387 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.62■□□□□ 0.41
TOP1P11387 RN7SL713P-201ENST00000582127 302 ntBASIC17.62■□□□□ 0.41
TOP1P11387 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.62■□□□□ 0.41
TOP1P11387 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.62■□□□□ 0.41
TOP1P11387 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TOP1P11387 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TOP1P11387 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TOP1P11387 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.62■□□□□ 0.41
TOP1P11387 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TOP1P11387 LINC01101-201ENST00000622953 1884 ntBASIC17.62■□□□□ 0.41
TOP1P11387 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TOP1P11387 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TOP1P11387 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TOP1P11387 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TOP1P11387 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
TOP1P11387 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.62■□□□□ 0.41
TOP1P11387 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.62■□□□□ 0.41
TOP1P11387 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TOP1P11387 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC17.61■□□□□ 0.41
TOP1P11387 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TOP1P11387 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TOP1P11387 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TOP1P11387 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TOP1P11387 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.61■□□□□ 0.41
TOP1P11387 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TOP1P11387 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.61■□□□□ 0.41
TOP1P11387 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TOP1P11387 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC17.61■□□□□ 0.41
TOP1P11387 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC17.61■□□□□ 0.41
TOP1P11387 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.61■□□□□ 0.41
TOP1P11387 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TOP1P11387 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TOP1P11387 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TOP1P11387 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.61■□□□□ 0.41
TOP1P11387 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.61■□□□□ 0.41
TOP1P11387 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.61■□□□□ 0.41
TOP1P11387 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TOP1P11387 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.61■□□□□ 0.41
TOP1P11387 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.61■□□□□ 0.41
TOP1P11387 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.61■□□□□ 0.41
TOP1P11387 RPL13AP20-201ENST00000459725 609 ntBASIC17.61■□□□□ 0.41
TOP1P11387 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.61■□□□□ 0.41
TOP1P11387 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TOP1P11387 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.61■□□□□ 0.41
TOP1P11387 RN7SL560P-201ENST00000577943 264 ntBASIC17.61■□□□□ 0.41
TOP1P11387 MIR4741-201ENST00000579822 90 ntBASIC17.61■□□□□ 0.41
TOP1P11387 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TOP1P11387 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TOP1P11387 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TOP1P11387 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TOP1P11387 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
TOP1P11387 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TOP1P11387 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TOP1P11387 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TOP1P11387 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TOP1P11387 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TOP1P11387 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TOP1P11387 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TOP1P11387 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TOP1P11387 CICP23-201ENST00000605013 2741 ntBASIC17.61■□□□□ 0.41
TOP1P11387 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TOP1P11387 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TOP1P11387 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TOP1P11387 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
TOP1P11387 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TOP1P11387 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TOP1P11387 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TOP1P11387 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
TOP1P11387 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TOP1P11387 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.6■□□□□ 0.41
TOP1P11387 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
TOP1P11387 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TOP1P11387 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TOP1P11387 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TOP1P11387 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TOP1P11387 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.6■□□□□ 0.41
TOP1P11387 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TOP1P11387 MIR1908-201ENST00000410394 80 ntBASIC17.6■□□□□ 0.41
TOP1P11387 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.6■□□□□ 0.41
TOP1P11387 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.6■□□□□ 0.41
TOP1P11387 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.6■□□□□ 0.41
TOP1P11387 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TOP1P11387 HOMER2P2-201ENST00000451621 847 ntBASIC17.6■□□□□ 0.41
TOP1P11387 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TOP1P11387 AC092658.1-201ENST00000505836 891 ntBASIC17.6■□□□□ 0.41
TOP1P11387 AP006547.1-201ENST00000563435 692 ntBASIC17.6■□□□□ 0.41
TOP1P11387 AC073413.1-201ENST00000603927 732 ntBASIC17.6■□□□□ 0.41
TOP1P11387 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms