Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD28P10747 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD28P10747 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD28P10747 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
CD28P10747 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD28P10747 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC11.75□□□□□ -0.53
CD28P10747 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC11.75□□□□□ -0.53
CD28P10747 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD28P10747 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CD28P10747 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC11.75□□□□□ -0.53
CD28P10747 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD28P10747 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CD28P10747 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC11.75□□□□□ -0.53
CD28P10747 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD28P10747 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC11.75□□□□□ -0.53
CD28P10747 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
CD28P10747 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD28P10747 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD28P10747 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD28P10747 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD28P10747 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC11.74□□□□□ -0.53
CD28P10747 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD28P10747 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CD28P10747 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CD28P10747 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD28P10747 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CD28P10747 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
CD28P10747 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD28P10747 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD28P10747 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CD28P10747 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD28P10747 PES1-204ENST00000402284 2144 ntTSL 5 BASIC11.74□□□□□ -0.53
CD28P10747 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD28P10747 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD28P10747 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD28P10747 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD28P10747 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
CD28P10747 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC11.74□□□□□ -0.53
CD28P10747 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CD28P10747 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
CD28P10747 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC11.74□□□□□ -0.53
CD28P10747 CSH2-202ENST00000345366 598 ntTSL 5 BASIC11.74□□□□□ -0.53
CD28P10747 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CD28P10747 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
CD28P10747 AC104457.1-201ENST00000401024 814 ntBASIC11.74□□□□□ -0.53
CD28P10747 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC11.74□□□□□ -0.53
CD28P10747 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC11.74□□□□□ -0.53
CD28P10747 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC11.74□□□□□ -0.53
CD28P10747 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC11.74□□□□□ -0.53
CD28P10747 ATP6V0CP2-201ENST00000469409 207 ntBASIC11.74□□□□□ -0.53
CD28P10747 AC100850.1-201ENST00000506768 649 ntBASIC11.74□□□□□ -0.53
CD28P10747 ADM-202ENST00000524948 584 ntTSL 2 BASIC11.74□□□□□ -0.53
CD28P10747 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CD28P10747 AC005730.2-201ENST00000564549 1184 ntBASIC11.74□□□□□ -0.53
CD28P10747 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CD28P10747 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC11.74□□□□□ -0.53
CD28P10747 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
CD28P10747 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
CD28P10747 DIO1-215ENST00000610607 796 ntTSL 5 BASIC11.74□□□□□ -0.53
CD28P10747 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC11.74□□□□□ -0.53
CD28P10747 FKBP4P6-201ENST00000457486 1332 ntBASIC11.74□□□□□ -0.53
CD28P10747 AL360270.3-201ENST00000609118 1348 ntBASIC11.74□□□□□ -0.53
CD28P10747 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CD28P10747 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CD28P10747 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC11.74□□□□□ -0.53
CD28P10747 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CD28P10747 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CD28P10747 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC11.74□□□□□ -0.53
CD28P10747 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD28P10747 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
CD28P10747 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC11.74□□□□□ -0.53
CD28P10747 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC11.74□□□□□ -0.53
CD28P10747 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC11.74□□□□□ -0.53
CD28P10747 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC11.74□□□□□ -0.53
CD28P10747 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD28P10747 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC11.74□□□□□ -0.53
CD28P10747 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
CD28P10747 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD28P10747 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CD28P10747 AL359258.3-201ENST00000622910 2331 ntBASIC11.74□□□□□ -0.53
CD28P10747 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD28P10747 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CD28P10747 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CD28P10747 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
CD28P10747 AC092384.3-202ENST00000564646 2873 ntBASIC11.73□□□□□ -0.53
CD28P10747 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
CD28P10747 AC023824.1-201ENST00000562945 2975 ntBASIC11.73□□□□□ -0.53
CD28P10747 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
CD28P10747 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
CD28P10747 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD28P10747 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
CD28P10747 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD28P10747 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC11.73□□□□□ -0.53
CD28P10747 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD28P10747 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD28P10747 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD28P10747 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
CD28P10747 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD28P10747 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD28P10747 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms