Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC21.37■■□□□ 1.01
CHGAP10645 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHGAP10645 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHGAP10645 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC21.37■■□□□ 1.01
CHGAP10645 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CHGAP10645 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CHGAP10645 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CHGAP10645 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHGAP10645 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CHGAP10645 NCR3-202ENST00000376071 541 ntTSL 5 BASIC21.37■■□□□ 1.01
CHGAP10645 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CHGAP10645 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC21.37■■□□□ 1.01
CHGAP10645 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC21.37■■□□□ 1.01
CHGAP10645 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC21.37■■□□□ 1.01
CHGAP10645 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC21.37■■□□□ 1.01
CHGAP10645 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC21.37■■□□□ 1.01
CHGAP10645 FOS-204ENST00000554617 796 ntTSL 2 BASIC21.37■■□□□ 1.01
CHGAP10645 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CHGAP10645 MIR3677-201ENST00000578964 60 ntBASIC21.37■■□□□ 1.01
CHGAP10645 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC21.37■■□□□ 1.01
CHGAP10645 HLA-C-210ENST00000640219 976 ntBASIC21.37■■□□□ 1.01
CHGAP10645 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC21.37■■□□□ 1.01
CHGAP10645 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC21.37■■□□□ 1.01
CHGAP10645 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHGAP10645 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CHGAP10645 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHGAP10645 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHGAP10645 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHGAP10645 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHGAP10645 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHGAP10645 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHGAP10645 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CHGAP10645 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHGAP10645 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHGAP10645 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHGAP10645 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHGAP10645 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHGAP10645 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHGAP10645 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC21.36■■□□□ 1.01
CHGAP10645 TLE1P1-201ENST00000422965 589 ntBASIC21.36■■□□□ 1.01
CHGAP10645 AC114501.1-201ENST00000445949 172 ntBASIC21.36■■□□□ 1.01
CHGAP10645 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC21.36■■□□□ 1.01
CHGAP10645 RN7SL818P-201ENST00000485099 259 ntBASIC21.36■■□□□ 1.01
CHGAP10645 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC21.36■■□□□ 1.01
CHGAP10645 AC138894.2-201ENST00000602838 371 ntBASIC21.36■■□□□ 1.01
CHGAP10645 RN7SL725P-201ENST00000606439 259 ntBASIC21.36■■□□□ 1.01
CHGAP10645 AC242376.2-201ENST00000619355 883 ntBASIC21.36■■□□□ 1.01
CHGAP10645 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHGAP10645 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHGAP10645 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHGAP10645 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC21.36■■□□□ 1.01
CHGAP10645 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC21.36■■□□□ 1.01
CHGAP10645 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHGAP10645 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC21.36■■□□□ 1.01
CHGAP10645 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHGAP10645 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHGAP10645 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC21.36■■□□□ 1.01
CHGAP10645 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHGAP10645 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC21.36■■□□□ 1.01
CHGAP10645 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC21.36■■□□□ 1.01
CHGAP10645 AC023024.2-201ENST00000623561 1993 ntBASIC21.36■■□□□ 1.01
CHGAP10645 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHGAP10645 AC008894.3-201ENST00000624324 3103 ntBASIC21.35■■□□□ 1.01
CHGAP10645 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC21.35■■□□□ 1.01
CHGAP10645 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHGAP10645 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHGAP10645 AL512430.1-201ENST00000392575 860 ntBASIC21.35■■□□□ 1.01
CHGAP10645 HPGD-203ENST00000422112 805 ntTSL 2 BASIC21.35■■□□□ 1.01
CHGAP10645 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CHGAP10645 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC21.35■■□□□ 1.01
CHGAP10645 AC079112.1-201ENST00000454972 939 ntBASIC21.35■■□□□ 1.01
CHGAP10645 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC21.35■■□□□ 1.01
CHGAP10645 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC21.35■■□□□ 1.01
CHGAP10645 NAT9-220ENST00000582870 896 ntTSL 5 BASIC21.35■■□□□ 1.01
CHGAP10645 WT1-AS_6.1-201ENST00000614919 121 ntBASIC21.35■■□□□ 1.01
CHGAP10645 AP001065.2-201ENST00000617205 644 ntBASIC21.35■■□□□ 1.01
CHGAP10645 DDX5-235ENST00000630471 473 ntTSL 4 BASIC21.35■■□□□ 1.01
CHGAP10645 AC092299.1-201ENST00000632679 757 ntBASIC21.35■■□□□ 1.01
CHGAP10645 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CHGAP10645 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC21.35■■□□□ 1.01
CHGAP10645 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CHGAP10645 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHGAP10645 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC21.35■■□□□ 1.01
CHGAP10645 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHGAP10645 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHGAP10645 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC21.34■■□□□ 1.01
CHGAP10645 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHGAP10645 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHGAP10645 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC21.34■■□□□ 1.01
CHGAP10645 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC21.34■■□□□ 1.01
CHGAP10645 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHGAP10645 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHGAP10645 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHGAP10645 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC21.34■■□□□ 1.01
CHGAP10645 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC21.34■■□□□ 1.01
CHGAP10645 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC21.34■■□□□ 1.01
CHGAP10645 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHGAP10645 PFN2-202ENST00000423691 911 ntTSL 2 BASIC21.34■■□□□ 1.01
CHGAP10645 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC21.34■■□□□ 1.01
CHGAP10645 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms