Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
PTPRFP10586 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PTPRFP10586 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPRFP10586 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPRFP10586 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PTPRFP10586 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.73■□□□□ 0.27
PTPRFP10586 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.73■□□□□ 0.27
PTPRFP10586 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.73■□□□□ 0.27
PTPRFP10586 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPRFP10586 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPRFP10586 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPRFP10586 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTPRFP10586 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC16.72■□□□□ 0.27
PTPRFP10586 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTPRFP10586 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTPRFP10586 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC16.72■□□□□ 0.27
PTPRFP10586 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPRFP10586 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC16.72■□□□□ 0.27
PTPRFP10586 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPRFP10586 KLF17P1-201ENST00000547105 1126 ntBASIC16.72■□□□□ 0.27
PTPRFP10586 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PTPRFP10586 AL133467.4-201ENST00000602953 725 ntBASIC16.72■□□□□ 0.27
PTPRFP10586 AL591471.1-201ENST00000621855 229 ntBASIC16.72■□□□□ 0.27
PTPRFP10586 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTPRFP10586 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPRFP10586 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTPRFP10586 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.72■□□□□ 0.27
PTPRFP10586 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPRFP10586 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPRFP10586 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTPRFP10586 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PTPRFP10586 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPRFP10586 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.72■□□□□ 0.27
PTPRFP10586 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPRFP10586 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPRFP10586 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPRFP10586 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPRFP10586 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTPRFP10586 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPRFP10586 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.72■□□□□ 0.27
PTPRFP10586 AC091951.1-201ENST00000512854 2465 ntBASIC16.72■□□□□ 0.27
PTPRFP10586 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPRFP10586 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPRFP10586 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.72■□□□□ 0.27
PTPRFP10586 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.72■□□□□ 0.27
PTPRFP10586 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPRFP10586 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPRFP10586 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPRFP10586 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PTPRFP10586 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPRFP10586 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPRFP10586 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPRFP10586 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC16.72■□□□□ 0.27
PTPRFP10586 RN7SL530P-201ENST00000485097 298 ntBASIC16.72■□□□□ 0.27
PTPRFP10586 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPRFP10586 IGHV1-12-201ENST00000518307 205 ntBASIC16.72■□□□□ 0.27
PTPRFP10586 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC16.72■□□□□ 0.27
PTPRFP10586 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
PTPRFP10586 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC16.72■□□□□ 0.27
PTPRFP10586 AL132994.1-201ENST00000554098 400 ntBASIC16.72■□□□□ 0.27
PTPRFP10586 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPRFP10586 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC16.72■□□□□ 0.27
PTPRFP10586 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPRFP10586 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPRFP10586 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPRFP10586 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.72■□□□□ 0.27
PTPRFP10586 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPRFP10586 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPRFP10586 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPRFP10586 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPRFP10586 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC16.71■□□□□ 0.27
PTPRFP10586 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PTPRFP10586 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PTPRFP10586 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPRFP10586 AC015688.4-201ENST00000580780 1647 ntBASIC16.71■□□□□ 0.27
PTPRFP10586 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.71■□□□□ 0.27
PTPRFP10586 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PTPRFP10586 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPRFP10586 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PTPRFP10586 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPRFP10586 AC108734.2-201ENST00000420887 1069 ntBASIC16.71■□□□□ 0.27
PTPRFP10586 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.71■□□□□ 0.27
PTPRFP10586 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC16.71■□□□□ 0.27
PTPRFP10586 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC16.71■□□□□ 0.27
PTPRFP10586 PGAM1P12-201ENST00000505622 748 ntBASIC16.71■□□□□ 0.27
PTPRFP10586 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC16.71■□□□□ 0.27
PTPRFP10586 HERC2P11-201ENST00000562845 725 ntBASIC16.71■□□□□ 0.27
PTPRFP10586 AC100756.2-201ENST00000569537 736 ntBASIC16.71■□□□□ 0.27
PTPRFP10586 SIGLEC22P-201ENST00000599104 714 ntBASIC16.71■□□□□ 0.27
PTPRFP10586 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC16.71■□□□□ 0.27
PTPRFP10586 TP53-221ENST00000615910 1149 ntTSL 5 BASIC16.71■□□□□ 0.27
PTPRFP10586 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
PTPRFP10586 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC16.71■□□□□ 0.27
PTPRFP10586 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
PTPRFP10586 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
PTPRFP10586 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPRFP10586 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
PTPRFP10586 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPRFP10586 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PTPRFP10586 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms