Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 GCOM2-201ENST00000509133 1104 ntBASIC19.66■□□□□ 0.74
CSB-PGBD3P0DP91 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CSB-PGBD3P0DP91 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC19.66■□□□□ 0.74
CSB-PGBD3P0DP91 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CSB-PGBD3P0DP91 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CSB-PGBD3P0DP91 AC093752.3-201ENST00000567343 901 ntBASIC19.66■□□□□ 0.74
CSB-PGBD3P0DP91 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC19.66■□□□□ 0.74
CSB-PGBD3P0DP91 MIR4522-201ENST00000584932 87 ntBASIC19.66■□□□□ 0.74
CSB-PGBD3P0DP91 HPN-206ENST00000597419 1212 ntTSL 5 BASIC19.66■□□□□ 0.74
CSB-PGBD3P0DP91 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
CSB-PGBD3P0DP91 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSB-PGBD3P0DP91 KRT18P9-201ENST00000604826 1300 ntBASIC19.66■□□□□ 0.74
CSB-PGBD3P0DP91 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC19.66■□□□□ 0.74
CSB-PGBD3P0DP91 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSB-PGBD3P0DP91 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CSB-PGBD3P0DP91 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC19.66■□□□□ 0.74
CSB-PGBD3P0DP91 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC19.66■□□□□ 0.74
CSB-PGBD3P0DP91 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSB-PGBD3P0DP91 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CSB-PGBD3P0DP91 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSB-PGBD3P0DP91 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 AC018629.1-201ENST00000623381 1736 ntBASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 BUD31-205ENST00000456893 512 ntTSL 5 BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 RPL17P45-201ENST00000586289 509 ntBASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CSB-PGBD3P0DP91 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CSB-PGBD3P0DP91 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC19.64■□□□□ 0.74
CSB-PGBD3P0DP91 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC19.64■□□□□ 0.74
CSB-PGBD3P0DP91 AC013726.1-201ENST00000563747 2285 ntBASIC19.64■□□□□ 0.74
CSB-PGBD3P0DP91 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC19.64■□□□□ 0.73
CSB-PGBD3P0DP91 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CSB-PGBD3P0DP91 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSB-PGBD3P0DP91 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CSB-PGBD3P0DP91 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC19.64■□□□□ 0.73
CSB-PGBD3P0DP91 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CSB-PGBD3P0DP91 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC19.64■□□□□ 0.73
CSB-PGBD3P0DP91 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CSB-PGBD3P0DP91 AL627422.1-201ENST00000434104 580 ntBASIC19.64■□□□□ 0.73
CSB-PGBD3P0DP91 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC19.64■□□□□ 0.73
CSB-PGBD3P0DP91 AC012362.1-201ENST00000434906 739 ntBASIC19.64■□□□□ 0.73
CSB-PGBD3P0DP91 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC19.64■□□□□ 0.73
CSB-PGBD3P0DP91 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC19.64■□□□□ 0.73
CSB-PGBD3P0DP91 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CSB-PGBD3P0DP91 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CSB-PGBD3P0DP91 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
CSB-PGBD3P0DP91 SIGLEC18P-201ENST00000602271 909 ntBASIC19.64■□□□□ 0.73
CSB-PGBD3P0DP91 AC007326.1-201ENST00000604539 458 ntBASIC19.64■□□□□ 0.73
CSB-PGBD3P0DP91 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSB-PGBD3P0DP91 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CSB-PGBD3P0DP91 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CSB-PGBD3P0DP91 AL513523.2-202ENST00000427283 2040 ntBASIC19.64■□□□□ 0.73
CSB-PGBD3P0DP91 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CSB-PGBD3P0DP91 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSB-PGBD3P0DP91 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSB-PGBD3P0DP91 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSB-PGBD3P0DP91 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC19.64■□□□□ 0.73
CSB-PGBD3P0DP91 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CSB-PGBD3P0DP91 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSB-PGBD3P0DP91 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CSB-PGBD3P0DP91 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
CSB-PGBD3P0DP91 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CSB-PGBD3P0DP91 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms