Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 ECM1P1-201ENST00000604092 1279 ntBASIC16.45■□□□□ 0.22
CLTAP09496 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLTAP09496 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.45■□□□□ 0.22
CLTAP09496 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLTAP09496 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLTAP09496 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.45■□□□□ 0.22
CLTAP09496 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.45■□□□□ 0.22
CLTAP09496 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CLTAP09496 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLTAP09496 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLTAP09496 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLTAP09496 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLTAP09496 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.45■□□□□ 0.22
CLTAP09496 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLTAP09496 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CLTAP09496 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLTAP09496 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.45■□□□□ 0.22
CLTAP09496 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CLTAP09496 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CLTAP09496 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.45■□□□□ 0.22
CLTAP09496 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.45■□□□□ 0.22
CLTAP09496 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CLTAP09496 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
CLTAP09496 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CLTAP09496 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CLTAP09496 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLTAP09496 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.44■□□□□ 0.22
CLTAP09496 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLTAP09496 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLTAP09496 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLTAP09496 CNTNAP3P2-201ENST00000617175 3861 ntBASIC16.44■□□□□ 0.22
CLTAP09496 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLTAP09496 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.44■□□□□ 0.22
CLTAP09496 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.44■□□□□ 0.22
CLTAP09496 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLTAP09496 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLTAP09496 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLTAP09496 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CLTAP09496 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.44■□□□□ 0.22
CLTAP09496 POM121L8P-201ENST00000417732 1281 ntBASIC16.44■□□□□ 0.22
CLTAP09496 HLA-V-201ENST00000429037 534 ntBASIC16.44■□□□□ 0.22
CLTAP09496 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.44■□□□□ 0.22
CLTAP09496 POM121L9P-203ENST00000441984 1285 ntBASIC16.44■□□□□ 0.22
CLTAP09496 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.44■□□□□ 0.22
CLTAP09496 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.44■□□□□ 0.22
CLTAP09496 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.44■□□□□ 0.22
CLTAP09496 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.44■□□□□ 0.22
CLTAP09496 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.44■□□□□ 0.22
CLTAP09496 AC008687.7-202ENST00000637404 953 ntBASIC16.44■□□□□ 0.22
CLTAP09496 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.44■□□□□ 0.22
CLTAP09496 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLTAP09496 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLTAP09496 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLTAP09496 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLTAP09496 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLTAP09496 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
CLTAP09496 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CLTAP09496 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CLTAP09496 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CLTAP09496 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
CLTAP09496 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLTAP09496 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLTAP09496 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLTAP09496 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLTAP09496 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLTAP09496 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CLTAP09496 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLTAP09496 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
CLTAP09496 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.44■□□□□ 0.22
CLTAP09496 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLTAP09496 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLTAP09496 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CLTAP09496 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLTAP09496 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLTAP09496 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.43■□□□□ 0.22
CLTAP09496 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLTAP09496 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLTAP09496 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLTAP09496 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLTAP09496 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLTAP09496 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.43■□□□□ 0.22
CLTAP09496 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CLTAP09496 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLTAP09496 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CLTAP09496 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.43■□□□□ 0.22
CLTAP09496 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CLTAP09496 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLTAP09496 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CLTAP09496 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.43■□□□□ 0.22
CLTAP09496 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.43■□□□□ 0.22
CLTAP09496 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLTAP09496 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.43■□□□□ 0.22
CLTAP09496 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.43■□□□□ 0.22
CLTAP09496 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.43■□□□□ 0.22
CLTAP09496 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.43■□□□□ 0.22
CLTAP09496 RPS2P32-201ENST00000439199 892 ntBASIC16.43■□□□□ 0.22
CLTAP09496 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.43■□□□□ 0.22
CLTAP09496 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.43■□□□□ 0.22
CLTAP09496 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.43■□□□□ 0.22
CLTAP09496 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms