Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RETP07949 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RETP07949 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
RETP07949 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RETP07949 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RETP07949 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.12■□□□□ 0.01
RETP07949 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
RETP07949 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RETP07949 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RETP07949 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RETP07949 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RETP07949 LINC01101-201ENST00000622953 1884 ntBASIC15.12■□□□□ 0.01
RETP07949 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RETP07949 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RETP07949 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RETP07949 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.12■□□□□ 0.01
RETP07949 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RETP07949 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RETP07949 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RETP07949 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RETP07949 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RETP07949 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RETP07949 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RETP07949 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.11■□□□□ 0.01
RETP07949 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.11■□□□□ 0.01
RETP07949 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RETP07949 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RETP07949 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RETP07949 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RETP07949 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RETP07949 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.11■□□□□ 0.01
RETP07949 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.11■□□□□ 0.01
RETP07949 RPSAP31-201ENST00000416648 895 ntBASIC15.11■□□□□ 0.01
RETP07949 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC15.11■□□□□ 0.01
RETP07949 CEP164P1-201ENST00000455142 418 ntBASIC15.11■□□□□ 0.01
RETP07949 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.11■□□□□ 0.01
RETP07949 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RETP07949 MARK2P5-201ENST00000507649 634 ntBASIC15.11■□□□□ 0.01
RETP07949 IGLV3-15-201ENST00000518356 244 ntBASIC15.11■□□□□ 0.01
RETP07949 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
RETP07949 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.11■□□□□ 0.01
RETP07949 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC15.11■□□□□ 0.01
RETP07949 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC15.11■□□□□ 0.01
RETP07949 AC012044.1-201ENST00000603431 297 ntBASIC15.11■□□□□ 0.01
RETP07949 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.11■□□□□ 0.01
RETP07949 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RETP07949 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RETP07949 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RETP07949 AC112693.3-201ENST00000624819 1983 ntBASIC15.11■□□□□ 0.01
RETP07949 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RETP07949 NORAD-201ENST00000565493 5339 ntBASIC15.11■□□□□ 0.01
RETP07949 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RETP07949 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RETP07949 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RETP07949 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.11■□□□□ 0.01
RETP07949 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
RETP07949 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.1■□□□□ 0.01
RETP07949 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RETP07949 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.1■□□□□ 0.01
RETP07949 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.1■□□□□ 0.01
RETP07949 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RETP07949 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
RETP07949 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RETP07949 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RETP07949 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RETP07949 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RETP07949 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RETP07949 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RETP07949 AL645937.2-201ENST00000396808 931 ntBASIC15.1■□□□□ 0.01
RETP07949 AL136309.1-201ENST00000403917 691 ntBASIC15.1■□□□□ 0.01
RETP07949 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.1■□□□□ 0.01
RETP07949 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RETP07949 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC15.1■□□□□ 0.01
RETP07949 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RETP07949 RNMTL1P1-201ENST00000454103 560 ntBASIC15.1■□□□□ 0.01
RETP07949 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.1■□□□□ 0.01
RETP07949 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RETP07949 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC15.1■□□□□ 0.01
RETP07949 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RETP07949 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC15.1■□□□□ 0.01
RETP07949 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.1■□□□□ 0.01
RETP07949 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC15.1■□□□□ 0.01
RETP07949 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RETP07949 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.1■□□□□ 0.01
RETP07949 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
RETP07949 AL136295.7-201ENST00000619226 1200 ntBASIC15.1■□□□□ 0.01
RETP07949 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
RETP07949 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RETP07949 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RETP07949 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.1■□□□□ 0.01
RETP07949 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RETP07949 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RETP07949 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RETP07949 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
RETP07949 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RETP07949 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.1■□□□□ 0.01
RETP07949 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.1■□□□□ 0.01
RETP07949 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RETP07949 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RETP07949 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms