Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CAPN1P07384 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN1P07384 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.84□□□□□ -0.03
CAPN1P07384 AC022210.1-201ENST00000449856 793 ntBASIC14.84□□□□□ -0.03
CAPN1P07384 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.84□□□□□ -0.03
CAPN1P07384 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.84□□□□□ -0.03
CAPN1P07384 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.84□□□□□ -0.03
CAPN1P07384 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.84□□□□□ -0.03
CAPN1P07384 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CAPN1P07384 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.84□□□□□ -0.03
CAPN1P07384 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.84□□□□□ -0.03
CAPN1P07384 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN1P07384 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN1P07384 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CAPN1P07384 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN1P07384 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN1P07384 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN1P07384 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN1P07384 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN1P07384 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.84□□□□□ -0.03
CAPN1P07384 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN1P07384 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.84□□□□□ -0.03
CAPN1P07384 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.84□□□□□ -0.03
CAPN1P07384 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN1P07384 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.84□□□□□ -0.03
CAPN1P07384 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN1P07384 AC015656.1-201ENST00000624209 3578 ntBASIC14.84□□□□□ -0.03
CAPN1P07384 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN1P07384 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN1P07384 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN1P07384 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
CAPN1P07384 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CAPN1P07384 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CAPN1P07384 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
CAPN1P07384 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN1P07384 AC126335.2-201ENST00000623362 4637 ntBASIC14.83□□□□□ -0.04
CAPN1P07384 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN1P07384 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN1P07384 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
CAPN1P07384 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CAPN1P07384 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN1P07384 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN1P07384 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN1P07384 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CAPN1P07384 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN1P07384 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
CAPN1P07384 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.83□□□□□ -0.04
CAPN1P07384 USP32P1-208ENST00000506594 1164 ntBASIC14.83□□□□□ -0.04
CAPN1P07384 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.83□□□□□ -0.04
CAPN1P07384 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.83□□□□□ -0.04
CAPN1P07384 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.83□□□□□ -0.04
CAPN1P07384 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.83□□□□□ -0.04
CAPN1P07384 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN1P07384 AL359711.2-201ENST00000563105 872 ntBASIC14.83□□□□□ -0.04
CAPN1P07384 AC015936.2-201ENST00000593177 259 ntBASIC14.83□□□□□ -0.04
CAPN1P07384 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.83□□□□□ -0.04
CAPN1P07384 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CAPN1P07384 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.83□□□□□ -0.04
CAPN1P07384 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN1P07384 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN1P07384 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN1P07384 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
CAPN1P07384 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.83□□□□□ -0.04
CAPN1P07384 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN1P07384 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN1P07384 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN1P07384 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.83□□□□□ -0.04
CAPN1P07384 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.83□□□□□ -0.04
CAPN1P07384 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.83□□□□□ -0.04
CAPN1P07384 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN1P07384 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN1P07384 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.83□□□□□ -0.04
CAPN1P07384 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN1P07384 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN1P07384 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN1P07384 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN1P07384 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN1P07384 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN1P07384 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN1P07384 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN1P07384 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.82□□□□□ -0.04
CAPN1P07384 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN1P07384 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.82□□□□□ -0.04
CAPN1P07384 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN1P07384 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
CAPN1P07384 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN1P07384 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.82□□□□□ -0.04
CAPN1P07384 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CAPN1P07384 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN1P07384 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.82□□□□□ -0.04
CAPN1P07384 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN1P07384 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN1P07384 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN1P07384 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.82□□□□□ -0.04
CAPN1P07384 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN1P07384 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.82□□□□□ -0.04
CAPN1P07384 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.82□□□□□ -0.04
CAPN1P07384 AC119751.2-201ENST00000504529 210 ntBASIC14.82□□□□□ -0.04
CAPN1P07384 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.82□□□□□ -0.04
CAPN1P07384 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms