Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND3P03897 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND3P03897 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND3P03897 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
MT-ND3P03897 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
MT-ND3P03897 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.37■□□□□ 0.05
MT-ND3P03897 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.37■□□□□ 0.05
MT-ND3P03897 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.37■□□□□ 0.05
MT-ND3P03897 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND3P03897 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND3P03897 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND3P03897 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND3P03897 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND3P03897 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND3P03897 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND3P03897 AC152010.1-201ENST00000415779 2006 ntBASIC15.36■□□□□ 0.05
MT-ND3P03897 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND3P03897 CU639417.3-201ENST00000624240 1404 ntBASIC15.36■□□□□ 0.05
MT-ND3P03897 AC010327.5-201ENST00000586923 3061 ntBASIC15.36■□□□□ 0.05
MT-ND3P03897 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND3P03897 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND3P03897 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND3P03897 AC007541.1-201ENST00000570282 1469 ntBASIC15.36■□□□□ 0.05
MT-ND3P03897 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND3P03897 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND3P03897 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND3P03897 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND3P03897 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND3P03897 GK-202ENST00000378941 458 ntTSL 3 BASIC15.36■□□□□ 0.05
MT-ND3P03897 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND3P03897 DFFBP1-201ENST00000433250 979 ntBASIC15.36■□□□□ 0.05
MT-ND3P03897 KRT18P64-201ENST00000434946 1219 ntBASIC15.36■□□□□ 0.05
MT-ND3P03897 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.36■□□□□ 0.05
MT-ND3P03897 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.36■□□□□ 0.05
MT-ND3P03897 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.36■□□□□ 0.05
MT-ND3P03897 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.36■□□□□ 0.05
MT-ND3P03897 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.36■□□□□ 0.05
MT-ND3P03897 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.36■□□□□ 0.05
MT-ND3P03897 AL596325.1-201ENST00000563991 1082 ntBASIC15.36■□□□□ 0.05
MT-ND3P03897 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.36■□□□□ 0.05
MT-ND3P03897 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.36■□□□□ 0.05
MT-ND3P03897 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.36■□□□□ 0.05
MT-ND3P03897 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.36■□□□□ 0.05
MT-ND3P03897 MIR6069-201ENST00000620069 79 ntBASIC15.36■□□□□ 0.05
MT-ND3P03897 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.36■□□□□ 0.05
MT-ND3P03897 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND3P03897 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.36■□□□□ 0.05
MT-ND3P03897 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND3P03897 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND3P03897 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
MT-ND3P03897 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
MT-ND3P03897 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND3P03897 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND3P03897 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
MT-ND3P03897 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.36■□□□□ 0.05
MT-ND3P03897 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.36■□□□□ 0.05
MT-ND3P03897 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND3P03897 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.35■□□□□ 0.05
MT-ND3P03897 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
MT-ND3P03897 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
MT-ND3P03897 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
MT-ND3P03897 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
MT-ND3P03897 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MT-ND3P03897 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.35■□□□□ 0.05
MT-ND3P03897 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MT-ND3P03897 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.35■□□□□ 0.05
MT-ND3P03897 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
MT-ND3P03897 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.35■□□□□ 0.05
MT-ND3P03897 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MT-ND3P03897 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.35■□□□□ 0.05
MT-ND3P03897 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
MT-ND3P03897 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MT-ND3P03897 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.35■□□□□ 0.05
MT-ND3P03897 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MT-ND3P03897 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MT-ND3P03897 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
MT-ND3P03897 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MT-ND3P03897 NME2P1-201ENST00000426182 414 ntBASIC15.35■□□□□ 0.05
MT-ND3P03897 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.35■□□□□ 0.05
MT-ND3P03897 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.35■□□□□ 0.05
MT-ND3P03897 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.35■□□□□ 0.05
MT-ND3P03897 KRT17P7-201ENST00000451704 1104 ntBASIC15.35■□□□□ 0.05
MT-ND3P03897 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.35■□□□□ 0.05
MT-ND3P03897 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.35■□□□□ 0.05
MT-ND3P03897 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MT-ND3P03897 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.35■□□□□ 0.05
MT-ND3P03897 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
MT-ND3P03897 TP53TG3HP-202ENST00000569755 579 ntBASIC15.35■□□□□ 0.05
MT-ND3P03897 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.35■□□□□ 0.05
MT-ND3P03897 AC140912.1-201ENST00000577171 1054 ntBASIC15.35■□□□□ 0.05
MT-ND3P03897 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.35■□□□□ 0.05
MT-ND3P03897 AL132655.2-201ENST00000596276 594 ntBASIC15.35■□□□□ 0.05
MT-ND3P03897 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MT-ND3P03897 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
MT-ND3P03897 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
MT-ND3P03897 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.35■□□□□ 0.05
MT-ND3P03897 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
MT-ND3P03897 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.35■□□□□ 0.05
MT-ND3P03897 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MT-ND3P03897 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms