Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 PPIA-210ENST00000620047 827 ntTSL 5 BASIC16.78■□□□□ 0.28
ALDH1A1P00352 AC006372.4-201ENST00000624122 1543 ntBASIC16.78■□□□□ 0.28
ALDH1A1P00352 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALDH1A1P00352 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALDH1A1P00352 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.78■□□□□ 0.28
ALDH1A1P00352 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALDH1A1P00352 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.78■□□□□ 0.28
ALDH1A1P00352 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALDH1A1P00352 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALDH1A1P00352 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALDH1A1P00352 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.78■□□□□ 0.28
ALDH1A1P00352 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.78■□□□□ 0.28
ALDH1A1P00352 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALDH1A1P00352 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.78■□□□□ 0.28
ALDH1A1P00352 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALDH1A1P00352 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.78■□□□□ 0.28
ALDH1A1P00352 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ALDH1A1P00352 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALDH1A1P00352 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
ALDH1A1P00352 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
ALDH1A1P00352 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ALDH1A1P00352 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
ALDH1A1P00352 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.77■□□□□ 0.28
ALDH1A1P00352 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ALDH1A1P00352 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
ALDH1A1P00352 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.77■□□□□ 0.28
ALDH1A1P00352 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ALDH1A1P00352 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ALDH1A1P00352 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ALDH1A1P00352 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ALDH1A1P00352 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
ALDH1A1P00352 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
ALDH1A1P00352 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.77■□□□□ 0.28
ALDH1A1P00352 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ALDH1A1P00352 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.77■□□□□ 0.28
ALDH1A1P00352 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ALDH1A1P00352 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.77■□□□□ 0.28
ALDH1A1P00352 MIR645-201ENST00000385283 94 ntBASIC16.77■□□□□ 0.28
ALDH1A1P00352 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ALDH1A1P00352 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ALDH1A1P00352 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC16.77■□□□□ 0.28
ALDH1A1P00352 VENTXP4-201ENST00000449029 958 ntBASIC16.77■□□□□ 0.28
ALDH1A1P00352 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
ALDH1A1P00352 AC063952.3-201ENST00000467756 308 ntBASIC16.77■□□□□ 0.28
ALDH1A1P00352 AC026470.1-201ENST00000478038 846 ntBASIC16.77■□□□□ 0.28
ALDH1A1P00352 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ALDH1A1P00352 AC027139.1-201ENST00000565286 951 ntBASIC16.77■□□□□ 0.28
ALDH1A1P00352 DRG2-220ENST00000583355 891 ntTSL 3 BASIC16.77■□□□□ 0.28
ALDH1A1P00352 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC16.77■□□□□ 0.28
ALDH1A1P00352 ST5-261ENST00000626808 1071 ntTSL 5 BASIC16.77■□□□□ 0.28
ALDH1A1P00352 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC16.77■□□□□ 0.28
ALDH1A1P00352 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC16.77■□□□□ 0.28
ALDH1A1P00352 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ALDH1A1P00352 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
ALDH1A1P00352 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ALDH1A1P00352 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
ALDH1A1P00352 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ALDH1A1P00352 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ALDH1A1P00352 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.77■□□□□ 0.27
ALDH1A1P00352 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ALDH1A1P00352 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
ALDH1A1P00352 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
ALDH1A1P00352 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
ALDH1A1P00352 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
ALDH1A1P00352 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.27
ALDH1A1P00352 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
ALDH1A1P00352 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ALDH1A1P00352 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
ALDH1A1P00352 AL136172.1-201ENST00000598590 1394 ntBASIC16.77■□□□□ 0.27
ALDH1A1P00352 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALDH1A1P00352 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALDH1A1P00352 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ALDH1A1P00352 AL359258.3-201ENST00000622910 2331 ntBASIC16.76■□□□□ 0.27
ALDH1A1P00352 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
ALDH1A1P00352 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
ALDH1A1P00352 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALDH1A1P00352 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALDH1A1P00352 AC023090.2-201ENST00000625182 2110 ntBASIC16.76■□□□□ 0.27
ALDH1A1P00352 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALDH1A1P00352 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALDH1A1P00352 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ALDH1A1P00352 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ALDH1A1P00352 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC16.76■□□□□ 0.27
ALDH1A1P00352 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ALDH1A1P00352 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.76■□□□□ 0.27
ALDH1A1P00352 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.76■□□□□ 0.27
ALDH1A1P00352 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALDH1A1P00352 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC16.76■□□□□ 0.27
ALDH1A1P00352 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALDH1A1P00352 AL513523.2-202ENST00000427283 2040 ntBASIC16.76■□□□□ 0.27
ALDH1A1P00352 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ALDH1A1P00352 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALDH1A1P00352 UROS-201ENST00000368774 744 ntTSL 2 BASIC16.76■□□□□ 0.27
ALDH1A1P00352 MIR566-201ENST00000385187 94 ntBASIC16.76■□□□□ 0.27
ALDH1A1P00352 CELP-201ENST00000411440 1249 ntTSL 5 BASIC16.76■□□□□ 0.27
ALDH1A1P00352 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC16.76■□□□□ 0.27
ALDH1A1P00352 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.76■□□□□ 0.27
ALDH1A1P00352 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC16.76■□□□□ 0.27
ALDH1A1P00352 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.76■□□□□ 0.27
ALDH1A1P00352 AC124068.2-201ENST00000569473 1109 ntBASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms