Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AC095040.1-201ENST00000513286 675 ntBASIC19.28■□□□□ 0.68
LTN1O94822 AC140658.4-201ENST00000561990 352 ntBASIC19.28■□□□□ 0.68
LTN1O94822 AC005357.2-202ENST00000590507 1060 ntBASIC19.28■□□□□ 0.68
LTN1O94822 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LTN1O94822 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LTN1O94822 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC19.28■□□□□ 0.68
LTN1O94822 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
LTN1O94822 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LTN1O94822 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LTN1O94822 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LTN1O94822 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC19.28■□□□□ 0.68
LTN1O94822 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC19.28■□□□□ 0.68
LTN1O94822 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LTN1O94822 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LTN1O94822 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LTN1O94822 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.27■□□□□ 0.68
LTN1O94822 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LTN1O94822 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
LTN1O94822 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
LTN1O94822 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LTN1O94822 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC19.27■□□□□ 0.68
LTN1O94822 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LTN1O94822 RN7SL818P-201ENST00000485099 259 ntBASIC19.27■□□□□ 0.68
LTN1O94822 DBP-202ENST00000593500 712 ntTSL 2 BASIC19.27■□□□□ 0.68
LTN1O94822 RN7SL725P-201ENST00000606439 259 ntBASIC19.27■□□□□ 0.68
LTN1O94822 AC021016.3-201ENST00000608367 477 ntBASIC19.27■□□□□ 0.68
LTN1O94822 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
LTN1O94822 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
LTN1O94822 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC19.27■□□□□ 0.68
LTN1O94822 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LTN1O94822 TEKT4P2-202ENST00000559466 1312 ntBASIC19.27■□□□□ 0.68
LTN1O94822 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
LTN1O94822 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LTN1O94822 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LTN1O94822 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.27■□□□□ 0.68
LTN1O94822 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
LTN1O94822 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LTN1O94822 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
LTN1O94822 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LTN1O94822 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
LTN1O94822 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LTN1O94822 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LTN1O94822 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LTN1O94822 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LTN1O94822 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC19.27■□□□□ 0.67
LTN1O94822 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC19.27■□□□□ 0.67
LTN1O94822 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC19.27■□□□□ 0.67
LTN1O94822 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC19.27■□□□□ 0.67
LTN1O94822 SORD2P-201ENST00000558556 1069 ntBASIC19.27■□□□□ 0.67
LTN1O94822 RN7SL470P-201ENST00000583069 259 ntBASIC19.27■□□□□ 0.67
LTN1O94822 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC19.27■□□□□ 0.67
LTN1O94822 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.26■□□□□ 0.67
LTN1O94822 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LTN1O94822 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LTN1O94822 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
LTN1O94822 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LTN1O94822 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LTN1O94822 AL354702.1-201ENST00000442006 1960 ntBASIC19.26■□□□□ 0.67
LTN1O94822 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LTN1O94822 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LTN1O94822 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LTN1O94822 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LTN1O94822 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LTN1O94822 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC19.26■□□□□ 0.67
LTN1O94822 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LTN1O94822 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
LTN1O94822 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LTN1O94822 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
LTN1O94822 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC19.26■□□□□ 0.67
LTN1O94822 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC19.26■□□□□ 0.67
LTN1O94822 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC19.26■□□□□ 0.67
LTN1O94822 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC19.26■□□□□ 0.67
LTN1O94822 HERC2P11-201ENST00000562845 725 ntBASIC19.26■□□□□ 0.67
LTN1O94822 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC19.26■□□□□ 0.67
LTN1O94822 AC100756.2-201ENST00000569537 736 ntBASIC19.26■□□□□ 0.67
LTN1O94822 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC19.26■□□□□ 0.67
LTN1O94822 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC19.26■□□□□ 0.67
LTN1O94822 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC19.26■□□□□ 0.67
LTN1O94822 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
LTN1O94822 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LTN1O94822 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LTN1O94822 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LTN1O94822 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LTN1O94822 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
LTN1O94822 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LTN1O94822 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC19.26■□□□□ 0.67
LTN1O94822 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
LTN1O94822 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LTN1O94822 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LTN1O94822 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LTN1O94822 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LTN1O94822 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
LTN1O94822 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LTN1O94822 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LTN1O94822 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LTN1O94822 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LTN1O94822 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LTN1O94822 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC19.25■□□□□ 0.67
LTN1O94822 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC19.25■□□□□ 0.67
LTN1O94822 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms