Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH4O75427 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
LRCH4O75427 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH4O75427 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
LRCH4O75427 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.56■□□□□ 0.08
LRCH4O75427 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH4O75427 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH4O75427 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH4O75427 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH4O75427 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH4O75427 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH4O75427 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH4O75427 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH4O75427 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.56■□□□□ 0.08
LRCH4O75427 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.56■□□□□ 0.08
LRCH4O75427 AL355864.2-201ENST00000447420 863 ntBASIC15.56■□□□□ 0.08
LRCH4O75427 GCOM2-201ENST00000509133 1104 ntBASIC15.56■□□□□ 0.08
LRCH4O75427 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.56■□□□□ 0.08
LRCH4O75427 AC025279.2-201ENST00000569730 653 ntBASIC15.56■□□□□ 0.08
LRCH4O75427 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.56■□□□□ 0.08
LRCH4O75427 AC015936.2-201ENST00000593177 259 ntBASIC15.56■□□□□ 0.08
LRCH4O75427 AC008735.3-201ENST00000596646 500 ntBASIC15.56■□□□□ 0.08
LRCH4O75427 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.56■□□□□ 0.08
LRCH4O75427 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.56■□□□□ 0.08
LRCH4O75427 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.56■□□□□ 0.08
LRCH4O75427 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
LRCH4O75427 AC063926.2-201ENST00000623766 1308 ntBASIC15.56■□□□□ 0.08
LRCH4O75427 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.56■□□□□ 0.08
LRCH4O75427 AL136172.1-201ENST00000598590 1394 ntBASIC15.56■□□□□ 0.08
LRCH4O75427 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH4O75427 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
LRCH4O75427 HSPA7-201ENST00000445535 1927 ntBASIC15.56■□□□□ 0.08
LRCH4O75427 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.56■□□□□ 0.08
LRCH4O75427 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH4O75427 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH4O75427 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH4O75427 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH4O75427 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH4O75427 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH4O75427 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
LRCH4O75427 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.55■□□□□ 0.08
LRCH4O75427 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH4O75427 LINC01230-201ENST00000625222 3017 ntBASIC15.55■□□□□ 0.08
LRCH4O75427 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.55■□□□□ 0.08
LRCH4O75427 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH4O75427 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH4O75427 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH4O75427 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.55■□□□□ 0.08
LRCH4O75427 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH4O75427 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.55■□□□□ 0.08
LRCH4O75427 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.55■□□□□ 0.08
LRCH4O75427 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH4O75427 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH4O75427 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH4O75427 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH4O75427 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LRCH4O75427 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH4O75427 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH4O75427 MRPL37P1-201ENST00000592451 1337 ntBASIC15.55■□□□□ 0.08
LRCH4O75427 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LRCH4O75427 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH4O75427 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH4O75427 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.55■□□□□ 0.08
LRCH4O75427 AC092933.1-201ENST00000393644 945 ntBASIC15.55■□□□□ 0.08
LRCH4O75427 AC005034.1-201ENST00000426657 489 ntBASIC15.55■□□□□ 0.08
LRCH4O75427 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.55■□□□□ 0.08
LRCH4O75427 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.55■□□□□ 0.08
LRCH4O75427 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LRCH4O75427 AL391280.1-201ENST00000506969 1062 ntBASIC15.55■□□□□ 0.08
LRCH4O75427 SLC25A47P1-201ENST00000531577 414 ntBASIC15.55■□□□□ 0.08
LRCH4O75427 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.55■□□□□ 0.08
LRCH4O75427 AC132938.2-201ENST00000579188 680 ntBASIC15.55■□□□□ 0.08
LRCH4O75427 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.55■□□□□ 0.08
LRCH4O75427 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.55■□□□□ 0.08
LRCH4O75427 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.55■□□□□ 0.08
LRCH4O75427 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH4O75427 AL591163.1-201ENST00000641757 987 ntBASIC15.55■□□□□ 0.08
LRCH4O75427 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.55■□□□□ 0.08
LRCH4O75427 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH4O75427 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH4O75427 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.55■□□□□ 0.08
LRCH4O75427 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH4O75427 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.55■□□□□ 0.08
LRCH4O75427 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
LRCH4O75427 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.55■□□□□ 0.08
LRCH4O75427 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.55■□□□□ 0.08
LRCH4O75427 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH4O75427 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.55■□□□□ 0.08
LRCH4O75427 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH4O75427 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH4O75427 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH4O75427 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH4O75427 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH4O75427 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH4O75427 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH4O75427 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH4O75427 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH4O75427 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH4O75427 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
LRCH4O75427 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms