Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTNND1O60716 NAT9-211ENST00000580632 799 ntTSL 3 BASIC17.4■□□□□ 0.38
CTNND1O60716 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC17.4■□□□□ 0.38
CTNND1O60716 MIR7845-201ENST00000618396 99 ntBASIC17.4■□□□□ 0.38
CTNND1O60716 AC103691.2-201ENST00000618824 433 ntBASIC17.4■□□□□ 0.38
CTNND1O60716 CDK7-214ENST00000626796 358 ntTSL 5 BASIC17.4■□□□□ 0.38
CTNND1O60716 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC17.4■□□□□ 0.38
CTNND1O60716 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.4■□□□□ 0.38
CTNND1O60716 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTNND1O60716 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTNND1O60716 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTNND1O60716 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.4■□□□□ 0.38
CTNND1O60716 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTNND1O60716 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CTNND1O60716 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTNND1O60716 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTNND1O60716 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CTNND1O60716 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTNND1O60716 MROH4P-201ENST00000431302 1578 ntBASIC17.4■□□□□ 0.38
CTNND1O60716 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.4■□□□□ 0.38
CTNND1O60716 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTNND1O60716 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTNND1O60716 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.39■□□□□ 0.38
CTNND1O60716 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CTNND1O60716 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
CTNND1O60716 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
CTNND1O60716 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTNND1O60716 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTNND1O60716 ZBED1P1-201ENST00000502364 1930 ntBASIC17.39■□□□□ 0.37
CTNND1O60716 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTNND1O60716 KRT8P21-201ENST00000430398 1491 ntBASIC17.39■□□□□ 0.37
CTNND1O60716 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.39■□□□□ 0.37
CTNND1O60716 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTNND1O60716 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTNND1O60716 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CTNND1O60716 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CTNND1O60716 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTNND1O60716 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTNND1O60716 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC17.39■□□□□ 0.37
CTNND1O60716 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTNND1O60716 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTNND1O60716 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC17.39■□□□□ 0.37
CTNND1O60716 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC17.39■□□□□ 0.37
CTNND1O60716 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC17.39■□□□□ 0.37
CTNND1O60716 AC008267.1-201ENST00000474858 1069 ntBASIC17.39■□□□□ 0.37
CTNND1O60716 LY6E-208ENST00000520531 490 ntTSL 2 BASIC17.39■□□□□ 0.37
CTNND1O60716 MIR3147-201ENST00000577811 66 ntBASIC17.39■□□□□ 0.37
CTNND1O60716 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
CTNND1O60716 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTNND1O60716 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTNND1O60716 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTNND1O60716 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.39■□□□□ 0.37
CTNND1O60716 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTNND1O60716 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
CTNND1O60716 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC17.39■□□□□ 0.37
CTNND1O60716 AC092978.1-202ENST00000637590 1327 ntBASIC17.39■□□□□ 0.37
CTNND1O60716 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTNND1O60716 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTNND1O60716 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTNND1O60716 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTNND1O60716 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.39■□□□□ 0.37
CTNND1O60716 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTNND1O60716 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CTNND1O60716 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTNND1O60716 TBC1D3J-201ENST00000620719 1426 ntBASIC17.38■□□□□ 0.37
CTNND1O60716 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTNND1O60716 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTNND1O60716 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CTNND1O60716 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.38■□□□□ 0.37
CTNND1O60716 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTNND1O60716 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTNND1O60716 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.38■□□□□ 0.37
CTNND1O60716 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CTNND1O60716 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CTNND1O60716 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTNND1O60716 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTNND1O60716 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTNND1O60716 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CTNND1O60716 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.38■□□□□ 0.37
CTNND1O60716 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTNND1O60716 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTNND1O60716 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC17.38■□□□□ 0.37
CTNND1O60716 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC17.38■□□□□ 0.37
CTNND1O60716 RN7SL258P-201ENST00000478664 300 ntBASIC17.38■□□□□ 0.37
CTNND1O60716 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
CTNND1O60716 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC17.38■□□□□ 0.37
CTNND1O60716 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC17.38■□□□□ 0.37
CTNND1O60716 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC17.38■□□□□ 0.37
CTNND1O60716 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTNND1O60716 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTNND1O60716 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CTNND1O60716 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTNND1O60716 AC112693.3-201ENST00000624819 1983 ntBASIC17.38■□□□□ 0.37
CTNND1O60716 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTNND1O60716 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTNND1O60716 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17.38■□□□□ 0.37
CTNND1O60716 AC144522.1-201ENST00000625111 1658 ntBASIC17.38■□□□□ 0.37
CTNND1O60716 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTNND1O60716 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.38■□□□□ 0.37
CTNND1O60716 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms