Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP2A1O14983 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
ATP2A1O14983 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP2A1O14983 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP2A1O14983 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP2A1O14983 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.08■□□□□ 0.32
ATP2A1O14983 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.08■□□□□ 0.32
ATP2A1O14983 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ATP2A1O14983 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP2A1O14983 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.08■□□□□ 0.32
ATP2A1O14983 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A1O14983 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A1O14983 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A1O14983 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.07■□□□□ 0.32
ATP2A1O14983 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ATP2A1O14983 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
ATP2A1O14983 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.07■□□□□ 0.32
ATP2A1O14983 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A1O14983 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A1O14983 AC136621.1-201ENST00000624017 2304 ntBASIC17.07■□□□□ 0.32
ATP2A1O14983 FAM90A7P-201ENST00000382628 1395 ntBASIC17.07■□□□□ 0.32
ATP2A1O14983 FAM90A23P-201ENST00000400136 1395 ntBASIC17.07■□□□□ 0.32
ATP2A1O14983 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A1O14983 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A1O14983 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.07■□□□□ 0.32
ATP2A1O14983 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A1O14983 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A1O14983 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A1O14983 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A1O14983 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A1O14983 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.07■□□□□ 0.32
ATP2A1O14983 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC17.07■□□□□ 0.32
ATP2A1O14983 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.07■□□□□ 0.32
ATP2A1O14983 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A1O14983 SUPT4H1P2-201ENST00000501248 353 ntBASIC17.07■□□□□ 0.32
ATP2A1O14983 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC17.07■□□□□ 0.32
ATP2A1O14983 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
ATP2A1O14983 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
ATP2A1O14983 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.07■□□□□ 0.32
ATP2A1O14983 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.07■□□□□ 0.32
ATP2A1O14983 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ATP2A1O14983 HCG18-245ENST00000602550 559 ntTSL 4 BASIC17.07■□□□□ 0.32
ATP2A1O14983 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC17.07■□□□□ 0.32
ATP2A1O14983 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A1O14983 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A1O14983 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
ATP2A1O14983 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A1O14983 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A1O14983 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A1O14983 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
ATP2A1O14983 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A1O14983 HYMAI-201ENST00000635591 3347 ntBASIC17.07■□□□□ 0.32
ATP2A1O14983 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A1O14983 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.07■□□□□ 0.32
ATP2A1O14983 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A1O14983 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A1O14983 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.06■□□□□ 0.32
ATP2A1O14983 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.06■□□□□ 0.32
ATP2A1O14983 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ATP2A1O14983 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
ATP2A1O14983 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
ATP2A1O14983 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A1O14983 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.06■□□□□ 0.32
ATP2A1O14983 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A1O14983 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A1O14983 RN7SKP214-201ENST00000364208 315 ntBASIC17.06■□□□□ 0.32
ATP2A1O14983 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
ATP2A1O14983 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A1O14983 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A1O14983 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.06■□□□□ 0.32
ATP2A1O14983 AC006335.1-201ENST00000445200 547 ntBASIC17.06■□□□□ 0.32
ATP2A1O14983 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
ATP2A1O14983 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC17.06■□□□□ 0.32
ATP2A1O14983 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A1O14983 MIR6720-201ENST00000611664 98 ntBASIC17.06■□□□□ 0.32
ATP2A1O14983 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A1O14983 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A1O14983 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A1O14983 AL157791.1-201ENST00000553667 1699 ntBASIC17.06■□□□□ 0.32
ATP2A1O14983 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A1O14983 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A1O14983 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
ATP2A1O14983 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A1O14983 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A1O14983 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ATP2A1O14983 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
ATP2A1O14983 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.06■□□□□ 0.32
ATP2A1O14983 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A1O14983 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A1O14983 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A1O14983 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.05■□□□□ 0.32
ATP2A1O14983 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
ATP2A1O14983 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ATP2A1O14983 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A1O14983 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A1O14983 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A1O14983 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A1O14983 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.05■□□□□ 0.32
ATP2A1O14983 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A1O14983 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms