Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
E2F3O00716 SOCS2P1-201ENST00000417727 557 ntBASIC14.65□□□□□ -0.06
E2F3O00716 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.65□□□□□ -0.06
E2F3O00716 TTTY23B-201ENST00000442790 549 ntBASIC14.65□□□□□ -0.06
E2F3O00716 AC114812.1-204ENST00000449669 728 ntBASIC14.65□□□□□ -0.06
E2F3O00716 AC022210.1-201ENST00000449856 793 ntBASIC14.65□□□□□ -0.06
E2F3O00716 AC123567.1-201ENST00000548294 1261 ntBASIC14.65□□□□□ -0.06
E2F3O00716 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
E2F3O00716 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
E2F3O00716 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
E2F3O00716 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.65□□□□□ -0.06
E2F3O00716 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
E2F3O00716 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
E2F3O00716 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
E2F3O00716 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
E2F3O00716 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
E2F3O00716 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
E2F3O00716 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.65□□□□□ -0.06
E2F3O00716 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.65□□□□□ -0.06
E2F3O00716 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.65□□□□□ -0.06
E2F3O00716 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
E2F3O00716 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
E2F3O00716 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
E2F3O00716 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
E2F3O00716 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
E2F3O00716 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
E2F3O00716 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.64□□□□□ -0.07
E2F3O00716 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
E2F3O00716 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
E2F3O00716 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
E2F3O00716 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
E2F3O00716 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.64□□□□□ -0.07
E2F3O00716 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
E2F3O00716 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
E2F3O00716 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.64□□□□□ -0.07
E2F3O00716 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
E2F3O00716 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.64□□□□□ -0.07
E2F3O00716 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
E2F3O00716 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
E2F3O00716 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
E2F3O00716 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
E2F3O00716 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
E2F3O00716 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
E2F3O00716 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
E2F3O00716 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.64□□□□□ -0.07
E2F3O00716 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
E2F3O00716 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
E2F3O00716 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
E2F3O00716 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
E2F3O00716 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.64□□□□□ -0.07
E2F3O00716 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.64□□□□□ -0.07
E2F3O00716 KLF2P2-201ENST00000416807 1039 ntBASIC14.64□□□□□ -0.07
E2F3O00716 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
E2F3O00716 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.64□□□□□ -0.07
E2F3O00716 ELK1P1-201ENST00000485699 580 ntBASIC14.64□□□□□ -0.07
E2F3O00716 AC026434.2-201ENST00000506094 1078 ntBASIC14.64□□□□□ -0.07
E2F3O00716 AC022616.1-201ENST00000518688 554 ntBASIC14.64□□□□□ -0.07
E2F3O00716 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.64□□□□□ -0.07
E2F3O00716 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.64□□□□□ -0.07
E2F3O00716 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
E2F3O00716 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.64□□□□□ -0.07
E2F3O00716 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.64□□□□□ -0.07
E2F3O00716 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
E2F3O00716 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.64□□□□□ -0.07
E2F3O00716 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.64□□□□□ -0.07
E2F3O00716 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.64□□□□□ -0.07
E2F3O00716 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
E2F3O00716 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
E2F3O00716 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.64□□□□□ -0.07
E2F3O00716 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
E2F3O00716 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
E2F3O00716 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
E2F3O00716 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
E2F3O00716 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
E2F3O00716 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
E2F3O00716 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
E2F3O00716 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
E2F3O00716 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
E2F3O00716 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
E2F3O00716 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
E2F3O00716 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
E2F3O00716 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
E2F3O00716 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
E2F3O00716 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
E2F3O00716 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
E2F3O00716 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
E2F3O00716 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
E2F3O00716 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
E2F3O00716 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
E2F3O00716 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.64□□□□□ -0.07
E2F3O00716 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.63□□□□□ -0.07
E2F3O00716 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
E2F3O00716 LINC01230-201ENST00000625222 3017 ntBASIC14.63□□□□□ -0.07
E2F3O00716 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.63□□□□□ -0.07
E2F3O00716 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
E2F3O00716 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.63□□□□□ -0.07
E2F3O00716 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.63□□□□□ -0.07
E2F3O00716 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.63□□□□□ -0.07
E2F3O00716 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.63□□□□□ -0.07
E2F3O00716 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms