Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN5O00501 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN5O00501 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN5O00501 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CLDN5O00501 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN5O00501 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN5O00501 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
CLDN5O00501 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN5O00501 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.76■□□□□ 0.11
CLDN5O00501 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN5O00501 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN5O00501 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN5O00501 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
CLDN5O00501 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.76■□□□□ 0.11
CLDN5O00501 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.76■□□□□ 0.11
CLDN5O00501 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CLDN5O00501 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN5O00501 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN5O00501 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CLDN5O00501 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN5O00501 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN5O00501 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN5O00501 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN5O00501 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN5O00501 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN5O00501 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CLDN5O00501 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
CLDN5O00501 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.75■□□□□ 0.11
CLDN5O00501 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN5O00501 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN5O00501 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN5O00501 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
CLDN5O00501 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN5O00501 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CLDN5O00501 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
CLDN5O00501 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.75■□□□□ 0.11
CLDN5O00501 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.75■□□□□ 0.11
CLDN5O00501 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN5O00501 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN5O00501 AC104306.2-201ENST00000451877 341 ntBASIC15.75■□□□□ 0.11
CLDN5O00501 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CLDN5O00501 AC131206.1-201ENST00000538078 1211 ntBASIC15.75■□□□□ 0.11
CLDN5O00501 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN5O00501 AC005730.2-201ENST00000564549 1184 ntBASIC15.75■□□□□ 0.11
CLDN5O00501 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN5O00501 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.75■□□□□ 0.11
CLDN5O00501 MIR4783-201ENST00000580343 82 ntBASIC15.75■□□□□ 0.11
CLDN5O00501 AC104982.3-201ENST00000581995 514 ntBASIC15.75■□□□□ 0.11
CLDN5O00501 AL118558.3-201ENST00000607414 1079 ntBASIC15.75■□□□□ 0.11
CLDN5O00501 GPR182-203ENST00000622922 591 ntBASIC15.75■□□□□ 0.11
CLDN5O00501 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN5O00501 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN5O00501 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CLDN5O00501 CICP14-201ENST00000629111 2732 ntBASIC15.75■□□□□ 0.11
CLDN5O00501 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN5O00501 FGD5P1-202ENST00000614866 2498 ntBASIC15.75■□□□□ 0.11
CLDN5O00501 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN5O00501 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
CLDN5O00501 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN5O00501 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN5O00501 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN5O00501 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.75■□□□□ 0.11
CLDN5O00501 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN5O00501 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN5O00501 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN5O00501 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CLDN5O00501 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN5O00501 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN5O00501 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CLDN5O00501 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN5O00501 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN5O00501 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.74■□□□□ 0.11
CLDN5O00501 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CLDN5O00501 AC018735.1-201ENST00000437208 1502 ntBASIC15.74■□□□□ 0.11
CLDN5O00501 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN5O00501 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN5O00501 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN5O00501 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.74■□□□□ 0.11
CLDN5O00501 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN5O00501 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CLDN5O00501 AC006058.4-201ENST00000624016 1670 ntBASIC15.74■□□□□ 0.11
CLDN5O00501 LINC02228-204ENST00000642115 2962 ntBASIC15.74■□□□□ 0.11
CLDN5O00501 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN5O00501 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN5O00501 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN5O00501 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN5O00501 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN5O00501 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CLDN5O00501 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN5O00501 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CLDN5O00501 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CLDN5O00501 PFN1P12-201ENST00000455938 534 ntBASIC15.74■□□□□ 0.11
CLDN5O00501 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.74■□□□□ 0.11
CLDN5O00501 GCOM2-201ENST00000509133 1104 ntBASIC15.74■□□□□ 0.11
CLDN5O00501 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.74■□□□□ 0.11
CLDN5O00501 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN5O00501 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.74■□□□□ 0.11
CLDN5O00501 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDN5O00501 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN5O00501 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms