Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC11.02□□□□□ -0.64
SMKR1H3BMG3 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC11.02□□□□□ -0.64
SMKR1H3BMG3 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SMKR1H3BMG3 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC11.02□□□□□ -0.64
SMKR1H3BMG3 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 UNC93B7-201ENST00000509439 705 ntBASIC11.02□□□□□ -0.65
SMKR1H3BMG3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 PENK-208ENST00000523051 772 ntTSL 5 BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 UBL5-208ENST00000593087 320 ntTSL 3 BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 AL121912.1-201ENST00000603683 238 ntBASIC11.02□□□□□ -0.65
SMKR1H3BMG3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 AC116407.3-201ENST00000623905 1129 ntBASIC11.02□□□□□ -0.65
SMKR1H3BMG3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 ADK-205ENST00000539909 1866 ntTSL 2 BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMKR1H3BMG3 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
SMKR1H3BMG3 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC11.01□□□□□ -0.65
SMKR1H3BMG3 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SMKR1H3BMG3 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SMKR1H3BMG3 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
SMKR1H3BMG3 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SMKR1H3BMG3 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC11.01□□□□□ -0.65
SMKR1H3BMG3 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC11.01□□□□□ -0.65
SMKR1H3BMG3 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
SMKR1H3BMG3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
SMKR1H3BMG3 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC11.01□□□□□ -0.65
SMKR1H3BMG3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SMKR1H3BMG3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SMKR1H3BMG3 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
SMKR1H3BMG3 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SMKR1H3BMG3 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC11.01□□□□□ -0.65
SMKR1H3BMG3 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SMKR1H3BMG3 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SMKR1H3BMG3 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SMKR1H3BMG3 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
SMKR1H3BMG3 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
SMKR1H3BMG3 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC11.01□□□□□ -0.65
SMKR1H3BMG3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
SMKR1H3BMG3 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC11.01□□□□□ -0.65
SMKR1H3BMG3 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SMKR1H3BMG3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SMKR1H3BMG3 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SMKR1H3BMG3 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
SMKR1H3BMG3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SMKR1H3BMG3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SMKR1H3BMG3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SMKR1H3BMG3 TARDBPP1-201ENST00000442013 1203 ntBASIC11.01□□□□□ -0.65
SMKR1H3BMG3 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC11.01□□□□□ -0.65
SMKR1H3BMG3 EMBP1-201ENST00000458200 901 ntBASIC11.01□□□□□ -0.65
SMKR1H3BMG3 AC074386.1-202ENST00000463561 864 ntBASIC11.01□□□□□ -0.65
SMKR1H3BMG3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms