Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPB4C9JG80 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 AC136759.1-202ENST00000530858 2194 ntBASIC13.21□□□□□ -0.29
NPIPB4C9JG80 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.21□□□□□ -0.29
NPIPB4C9JG80 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 AL391280.1-201ENST00000506969 1062 ntBASIC13.21□□□□□ -0.29
NPIPB4C9JG80 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 SLC25A47P1-201ENST00000531577 414 ntBASIC13.21□□□□□ -0.29
NPIPB4C9JG80 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 AC008825.2-201ENST00000603374 718 ntBASIC13.21□□□□□ -0.29
NPIPB4C9JG80 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.21□□□□□ -0.29
NPIPB4C9JG80 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.21□□□□□ -0.3
NPIPB4C9JG80 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NPIPB4C9JG80 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.21□□□□□ -0.3
NPIPB4C9JG80 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
NPIPB4C9JG80 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
NPIPB4C9JG80 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
NPIPB4C9JG80 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
NPIPB4C9JG80 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
NPIPB4C9JG80 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
NPIPB4C9JG80 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
NPIPB4C9JG80 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
NPIPB4C9JG80 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
NPIPB4C9JG80 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NPIPB4C9JG80 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NPIPB4C9JG80 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 AL512384.1-201ENST00000406683 331 ntBASIC13.2□□□□□ -0.3
NPIPB4C9JG80 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 RN7SL692P-201ENST00000464677 288 ntBASIC13.2□□□□□ -0.3
NPIPB4C9JG80 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms