Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 AC016397.2-201ENST00000624848 1985 ntBASIC15.07■□□□□ 0
TRIM49D1C9J1S8 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 AL139400.1-201ENST00000366220 510 ntBASIC15.07■□□□□ 0
TRIM49D1C9J1S8 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 DRD5P1-201ENST00000456605 1438 ntBASIC15.07■□□□□ 0
TRIM49D1C9J1S8 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.07■□□□□ 0
TRIM49D1C9J1S8 AC089987.1-201ENST00000551654 2209 ntBASIC15.07■□□□□ 0
TRIM49D1C9J1S8 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.06■□□□□ 0
TRIM49D1C9J1S8 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 AC114501.2-201ENST00000439631 535 ntBASIC15.06■□□□□ 0
TRIM49D1C9J1S8 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 AP006288.1-201ENST00000446065 395 ntBASIC15.06■□□□□ 0
TRIM49D1C9J1S8 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 MEIS3P1-201ENST00000495167 958 ntBASIC15.06■□□□□ 0
TRIM49D1C9J1S8 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 AL391069.4-201ENST00000609583 481 ntBASIC15.06■□□□□ 0
TRIM49D1C9J1S8 AL596442.2-201ENST00000610240 980 ntBASIC15.06■□□□□ 0
TRIM49D1C9J1S8 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 AC012617.1-204ENST00000586340 2305 ntBASIC15.06■□□□□ 0
TRIM49D1C9J1S8 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms