Protein–RNA interactions for Protein: A6PVL3

KNCN, Kinocilin, humanhuman

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNCNA6PVL3 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
KNCNA6PVL3 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC11.29□□□□□ -0.6
KNCNA6PVL3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC11.29□□□□□ -0.6
KNCNA6PVL3 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KNCNA6PVL3 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
KNCNA6PVL3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
KNCNA6PVL3 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC11.29□□□□□ -0.6
KNCNA6PVL3 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KNCNA6PVL3 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
KNCNA6PVL3 CICP24-201ENST00000605464 2705 ntBASIC11.29□□□□□ -0.6
KNCNA6PVL3 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KNCNA6PVL3 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
KNCNA6PVL3 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KNCNA6PVL3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC11.29□□□□□ -0.6
KNCNA6PVL3 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
KNCNA6PVL3 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC11.29□□□□□ -0.6
KNCNA6PVL3 APOA1-205ENST00000375329 927 ntTSL 2 BASIC11.29□□□□□ -0.6
KNCNA6PVL3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
KNCNA6PVL3 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC11.29□□□□□ -0.6
KNCNA6PVL3 AL139094.1-201ENST00000405549 1188 ntBASIC11.29□□□□□ -0.6
KNCNA6PVL3 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC11.29□□□□□ -0.6
KNCNA6PVL3 RN7SL837P-201ENST00000463010 287 ntBASIC11.29□□□□□ -0.6
KNCNA6PVL3 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC11.29□□□□□ -0.6
KNCNA6PVL3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
KNCNA6PVL3 KRT18P25-201ENST00000508931 1278 ntBASIC11.29□□□□□ -0.6
KNCNA6PVL3 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC11.29□□□□□ -0.6
KNCNA6PVL3 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
KNCNA6PVL3 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC11.29□□□□□ -0.6
KNCNA6PVL3 NEU3-203ENST00000529024 581 ntTSL 3 BASIC11.29□□□□□ -0.6
KNCNA6PVL3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
KNCNA6PVL3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC11.29□□□□□ -0.6
KNCNA6PVL3 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC11.29□□□□□ -0.6
KNCNA6PVL3 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC11.29□□□□□ -0.6
KNCNA6PVL3 AP005019.2-201ENST00000615104 511 ntBASIC11.29□□□□□ -0.6
KNCNA6PVL3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC11.29□□□□□ -0.6
KNCNA6PVL3 SRP9-204ENST00000619790 377 ntTSL 2 BASIC11.29□□□□□ -0.6
KNCNA6PVL3 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC11.29□□□□□ -0.6
KNCNA6PVL3 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KNCNA6PVL3 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
KNCNA6PVL3 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KNCNA6PVL3 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
KNCNA6PVL3 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC11.29□□□□□ -0.6
KNCNA6PVL3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC11.29□□□□□ -0.6
KNCNA6PVL3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
KNCNA6PVL3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
KNCNA6PVL3 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
KNCNA6PVL3 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KNCNA6PVL3 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KNCNA6PVL3 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC11.29□□□□□ -0.6
KNCNA6PVL3 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC11.29□□□□□ -0.6
KNCNA6PVL3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC11.29□□□□□ -0.6
KNCNA6PVL3 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KNCNA6PVL3 MSTO2P-201ENST00000314835 1709 ntBASIC11.29□□□□□ -0.6
KNCNA6PVL3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KNCNA6PVL3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KNCNA6PVL3 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC11.29□□□□□ -0.6
KNCNA6PVL3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
KNCNA6PVL3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC11.29□□□□□ -0.6
KNCNA6PVL3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC11.29□□□□□ -0.6
KNCNA6PVL3 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
KNCNA6PVL3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
KNCNA6PVL3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC11.28□□□□□ -0.6
KNCNA6PVL3 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
KNCNA6PVL3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC11.28□□□□□ -0.6
KNCNA6PVL3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
KNCNA6PVL3 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
KNCNA6PVL3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
KNCNA6PVL3 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
KNCNA6PVL3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
KNCNA6PVL3 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
KNCNA6PVL3 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
KNCNA6PVL3 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
KNCNA6PVL3 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
KNCNA6PVL3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
KNCNA6PVL3 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
KNCNA6PVL3 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
KNCNA6PVL3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
KNCNA6PVL3 RPS15-201ENST00000233609 534 ntTSL 2 BASIC11.28□□□□□ -0.6
KNCNA6PVL3 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
KNCNA6PVL3 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC11.28□□□□□ -0.6
KNCNA6PVL3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
KNCNA6PVL3 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC11.28□□□□□ -0.6
KNCNA6PVL3 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC11.28□□□□□ -0.6
KNCNA6PVL3 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC11.28□□□□□ -0.6
KNCNA6PVL3 AC114812.1-204ENST00000449669 728 ntBASIC11.28□□□□□ -0.6
KNCNA6PVL3 COX20P2-201ENST00000452636 358 ntBASIC11.28□□□□□ -0.6
KNCNA6PVL3 AC009486.1-201ENST00000569860 813 ntBASIC11.28□□□□□ -0.6
KNCNA6PVL3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC11.28□□□□□ -0.6
KNCNA6PVL3 AC132938.2-201ENST00000579188 680 ntBASIC11.28□□□□□ -0.6
KNCNA6PVL3 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC11.28□□□□□ -0.6
KNCNA6PVL3 RPS15-205ENST00000586686 562 ntTSL 5 BASIC11.28□□□□□ -0.6
KNCNA6PVL3 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC11.28□□□□□ -0.6
KNCNA6PVL3 RPS15-208ENST00000591804 711 ntTSL 5 BASIC11.28□□□□□ -0.6
KNCNA6PVL3 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
KNCNA6PVL3 LINC02084-201ENST00000606069 1096 ntBASIC11.28□□□□□ -0.6
KNCNA6PVL3 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
KNCNA6PVL3 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
KNCNA6PVL3 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC11.28□□□□□ -0.6
KNCNA6PVL3 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC11.28□□□□□ -0.6
KNCNA6PVL3 AL358472.5-202ENST00000641448 1267 ntBASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms