Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.29■□□□□ 0.04
CAPN8A6NHC0 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN8A6NHC0 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.29■□□□□ 0.04
CAPN8A6NHC0 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.29■□□□□ 0.04
CAPN8A6NHC0 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN8A6NHC0 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN8A6NHC0 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CAPN8A6NHC0 AC005229.1-201ENST00000392885 409 ntBASIC15.29■□□□□ 0.04
CAPN8A6NHC0 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CAPN8A6NHC0 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.29■□□□□ 0.04
CAPN8A6NHC0 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.29■□□□□ 0.04
CAPN8A6NHC0 AL355864.2-201ENST00000447420 863 ntBASIC15.29■□□□□ 0.04
CAPN8A6NHC0 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.29■□□□□ 0.04
CAPN8A6NHC0 AP001889.1-201ENST00000525414 633 ntBASIC15.29■□□□□ 0.04
CAPN8A6NHC0 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CAPN8A6NHC0 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.29■□□□□ 0.04
CAPN8A6NHC0 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.29■□□□□ 0.04
CAPN8A6NHC0 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.29■□□□□ 0.04
CAPN8A6NHC0 MIR4538-201ENST00000581377 78 ntBASIC15.29■□□□□ 0.04
CAPN8A6NHC0 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN8A6NHC0 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.29■□□□□ 0.04
CAPN8A6NHC0 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.29■□□□□ 0.04
CAPN8A6NHC0 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN8A6NHC0 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN8A6NHC0 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN8A6NHC0 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.29■□□□□ 0.04
CAPN8A6NHC0 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN8A6NHC0 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN8A6NHC0 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN8A6NHC0 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
CAPN8A6NHC0 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN8A6NHC0 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CAPN8A6NHC0 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 REXO1L2P-201ENST00000425429 2069 ntBASIC15.28■□□□□ 0.04
CAPN8A6NHC0 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 AC106760.1-201ENST00000508690 800 ntBASIC15.28■□□□□ 0.04
CAPN8A6NHC0 SLC25A47P1-201ENST00000531577 414 ntBASIC15.28■□□□□ 0.04
CAPN8A6NHC0 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.28■□□□□ 0.04
CAPN8A6NHC0 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN8A6NHC0 PCDHA3-202ENST00000532566 4594 ntBASIC15.27■□□□□ 0.04
CAPN8A6NHC0 LRRC59-203ENST00000576448 1531 ntBASIC15.27■□□□□ 0.04
CAPN8A6NHC0 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN8A6NHC0 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.27■□□□□ 0.04
CAPN8A6NHC0 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN8A6NHC0 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.27■□□□□ 0.04
CAPN8A6NHC0 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.27■□□□□ 0.04
CAPN8A6NHC0 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CAPN8A6NHC0 AC018665.1-201ENST00000622927 1362 ntBASIC15.27■□□□□ 0.04
CAPN8A6NHC0 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CAPN8A6NHC0 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN8A6NHC0 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CAPN8A6NHC0 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
CAPN8A6NHC0 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN8A6NHC0 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN8A6NHC0 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN8A6NHC0 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN8A6NHC0 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms