Protein–RNA interactions for Protein: A4D0S4

LAMB4, Laminin subunit beta-4, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB4A4D0S4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LAMB4A4D0S4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.42■□□□□ 0.54
LAMB4A4D0S4 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LAMB4A4D0S4 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LAMB4A4D0S4 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
LAMB4A4D0S4 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC18.41■□□□□ 0.54
LAMB4A4D0S4 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LAMB4A4D0S4 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
LAMB4A4D0S4 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
LAMB4A4D0S4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
LAMB4A4D0S4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
LAMB4A4D0S4 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC18.41■□□□□ 0.54
LAMB4A4D0S4 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC18.41■□□□□ 0.54
LAMB4A4D0S4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LAMB4A4D0S4 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
LAMB4A4D0S4 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LAMB4A4D0S4 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LAMB4A4D0S4 AL627231.1-201ENST00000394467 1125 ntBASIC18.41■□□□□ 0.54
LAMB4A4D0S4 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC18.41■□□□□ 0.54
LAMB4A4D0S4 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC18.41■□□□□ 0.54
LAMB4A4D0S4 AC005586.2-201ENST00000563946 837 ntBASIC18.41■□□□□ 0.54
LAMB4A4D0S4 AC087045.2-201ENST00000606279 1003 ntBASIC18.41■□□□□ 0.54
LAMB4A4D0S4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
LAMB4A4D0S4 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LAMB4A4D0S4 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC18.41■□□□□ 0.54
LAMB4A4D0S4 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
LAMB4A4D0S4 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC18.41■□□□□ 0.54
LAMB4A4D0S4 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LAMB4A4D0S4 MARS-233ENST00000628866 2583 ntTSL 5 BASIC18.41■□□□□ 0.54
LAMB4A4D0S4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LAMB4A4D0S4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LAMB4A4D0S4 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LAMB4A4D0S4 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC18.41■□□□□ 0.54
LAMB4A4D0S4 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
LAMB4A4D0S4 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC18.41■□□□□ 0.54
LAMB4A4D0S4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.41■□□□□ 0.54
LAMB4A4D0S4 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LAMB4A4D0S4 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LAMB4A4D0S4 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
LAMB4A4D0S4 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LAMB4A4D0S4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
LAMB4A4D0S4 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
LAMB4A4D0S4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.4■□□□□ 0.54
LAMB4A4D0S4 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC18.4■□□□□ 0.54
LAMB4A4D0S4 PPP1R2P4-201ENST00000424051 595 ntBASIC18.4■□□□□ 0.54
LAMB4A4D0S4 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LAMB4A4D0S4 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LAMB4A4D0S4 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC18.4■□□□□ 0.54
LAMB4A4D0S4 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC18.4■□□□□ 0.54
LAMB4A4D0S4 AC138701.2-201ENST00000553634 226 ntBASIC18.4■□□□□ 0.54
LAMB4A4D0S4 MIR3147-201ENST00000577811 66 ntBASIC18.4■□□□□ 0.54
LAMB4A4D0S4 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC18.4■□□□□ 0.54
LAMB4A4D0S4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LAMB4A4D0S4 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LAMB4A4D0S4 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC18.4■□□□□ 0.54
LAMB4A4D0S4 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC18.4■□□□□ 0.54
LAMB4A4D0S4 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LAMB4A4D0S4 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LAMB4A4D0S4 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC18.4■□□□□ 0.54
LAMB4A4D0S4 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LAMB4A4D0S4 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LAMB4A4D0S4 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
LAMB4A4D0S4 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC18.4■□□□□ 0.54
LAMB4A4D0S4 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC18.4■□□□□ 0.54
LAMB4A4D0S4 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
LAMB4A4D0S4 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC18.4■□□□□ 0.54
LAMB4A4D0S4 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
LAMB4A4D0S4 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC18.4■□□□□ 0.54
LAMB4A4D0S4 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC18.4■□□□□ 0.54
LAMB4A4D0S4 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC18.4■□□□□ 0.54
LAMB4A4D0S4 DUX4L50-201ENST00000455245 715 ntBASIC18.4■□□□□ 0.54
LAMB4A4D0S4 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LAMB4A4D0S4 AC140658.4-201ENST00000561990 352 ntBASIC18.4■□□□□ 0.54
LAMB4A4D0S4 MIR2392-201ENST00000584881 84 ntBASIC18.4■□□□□ 0.54
LAMB4A4D0S4 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC18.4■□□□□ 0.54
LAMB4A4D0S4 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
LAMB4A4D0S4 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LAMB4A4D0S4 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC18.4■□□□□ 0.54
LAMB4A4D0S4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
LAMB4A4D0S4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
LAMB4A4D0S4 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LAMB4A4D0S4 CCT8L1P-201ENST00000465400 1674 ntBASIC18.39■□□□□ 0.54
LAMB4A4D0S4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LAMB4A4D0S4 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LAMB4A4D0S4 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LAMB4A4D0S4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.39■□□□□ 0.53
LAMB4A4D0S4 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC18.39■□□□□ 0.53
LAMB4A4D0S4 HLA-DQB1-202ENST00000399079 1501 ntBASIC18.39■□□□□ 0.53
LAMB4A4D0S4 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LAMB4A4D0S4 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC18.39■□□□□ 0.53
LAMB4A4D0S4 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC18.39■□□□□ 0.53
LAMB4A4D0S4 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC18.39■□□□□ 0.53
LAMB4A4D0S4 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
LAMB4A4D0S4 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC18.39■□□□□ 0.53
LAMB4A4D0S4 AC107464.3-201ENST00000609172 737 ntBASIC18.39■□□□□ 0.53
LAMB4A4D0S4 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
LAMB4A4D0S4 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC18.39■□□□□ 0.53
LAMB4A4D0S4 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LAMB4A4D0S4 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
LAMB4A4D0S4 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms