Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 AL591424.1-201ENST00000442569 1213 ntBASIC13.07□□□□□ -0.32
SHISA3A0PJX4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 RN7SL371P-201ENST00000578099 267 ntBASIC13.07□□□□□ -0.32
SHISA3A0PJX4 AC022145.2-201ENST00000598203 171 ntBASIC13.07□□□□□ -0.32
SHISA3A0PJX4 AC027601.4-201ENST00000611259 610 ntBASIC13.07□□□□□ -0.32
SHISA3A0PJX4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 CLK3P2-201ENST00000427566 1453 ntBASIC13.07□□□□□ -0.32
SHISA3A0PJX4 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 KRT18P32-201ENST00000424695 1287 ntBASIC13.06□□□□□ -0.32
SHISA3A0PJX4 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 NIFKP4-201ENST00000567275 1192 ntBASIC13.06□□□□□ -0.32
SHISA3A0PJX4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 FAM197Y3-203ENST00000618346 717 ntBASIC13.06□□□□□ -0.32
SHISA3A0PJX4 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 AC105339.1-204ENST00000636249 355 ntBASIC13.06□□□□□ -0.32
SHISA3A0PJX4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 PKD1P5-201ENST00000532415 10291 ntBASIC13.06□□□□□ -0.32
SHISA3A0PJX4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 AC093525.8-201ENST00000624099 1342 ntBASIC13.06□□□□□ -0.32
SHISA3A0PJX4 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 AC215219.1-201ENST00000400706 1817 ntBASIC13.06□□□□□ -0.32
SHISA3A0PJX4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 AL158070.2-201ENST00000623713 1621 ntBASIC13.06□□□□□ -0.32
SHISA3A0PJX4 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
SHISA3A0PJX4 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms