Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC011491.1-203ENST00000637688 543 ntBASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 Z98259.2-201ENST00000641583 609 ntBASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
CCDC187A0A096LP49 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 AC105250.1-201ENST00000509378 2057 ntBASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 KRT8P21-201ENST00000430398 1491 ntBASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 ALG3P1-201ENST00000508806 1114 ntBASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 NEU3-205ENST00000531619 582 ntTSL 5 BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.14□□□□□ -0.15
CCDC187A0A096LP49 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 RN7SL258P-201ENST00000478664 300 ntBASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms