Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 COL6A4P2-202ENST00000504443 2753 ntBASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 AGGF1P1-201ENST00000509500 2073 ntBASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 AL360270.3-201ENST00000609118 1348 ntBASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 MTND6P24-201ENST00000440466 518 ntBASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 ALG1L8P-201ENST00000533887 760 ntBASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 RPL18-209ENST00000550645 463 ntTSL 5 BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 RPL18-214ENST00000552588 559 ntTSL 3 BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 RN7SL828P-201ENST00000607615 303 ntBASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV18A0A075B6X5 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
TRAV18A0A075B6X5 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
TRAV18A0A075B6X5 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
TRAV18A0A075B6X5 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRAV18A0A075B6X5 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
TRAV18A0A075B6X5 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRAV18A0A075B6X5 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.96□□□□□ -0.34
TRAV18A0A075B6X5 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
TRAV18A0A075B6X5 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
TRAV18A0A075B6X5 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TRAV18A0A075B6X5 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRAV18A0A075B6X5 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.96□□□□□ -0.34
TRAV18A0A075B6X5 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
TRAV18A0A075B6X5 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.96□□□□□ -0.34
TRAV18A0A075B6X5 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.34
TRAV18A0A075B6X5 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
TRAV18A0A075B6X5 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 KRT8P24-201ENST00000560290 1559 ntBASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 AC005562.1-201ENST00000583030 3219 ntBASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 KRT18P3-201ENST00000451602 1288 ntBASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 AL133215.2-201ENST00000609242 977 ntBASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 MIR6069-201ENST00000620069 79 ntBASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 AF228730.6-201ENST00000641497 218 ntBASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 AC084121.3-201ENST00000641716 218 ntBASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms