Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 AL139094.1-201ENST00000405549 1188 ntBASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 AC124283.3-201ENST00000570869 594 ntBASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 LINC02560-201ENST00000596379 459 ntBASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 AC008761.3-201ENST00000624803 892 ntBASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 AC107918.4-201ENST00000641966 3141 ntBASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 HSPA7-201ENST00000445535 1927 ntBASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 AC136759.1-202ENST00000530858 2194 ntBASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 KRT8P14-201ENST00000414254 1442 ntBASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 BCRP1-201ENST00000444246 691 ntBASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 MYCLP2-201ENST00000449268 967 ntBASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 AC114812.1-204ENST00000449669 728 ntBASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 AP001582.1-201ENST00000525856 295 ntBASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 ENPP7P5-201ENST00000541031 1031 ntBASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 SPCS2P1-201ENST00000561636 679 ntBASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 AL359711.2-201ENST00000563105 872 ntBASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 SPDYE22P-201ENST00000582158 798 ntBASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 RN7SL275P-201ENST00000582762 335 ntBASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 AL603764.1-201ENST00000636452 321 ntBASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 1202.8 ms