Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
NINLQ9Y2I6 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NINLQ9Y2I6 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC20.28■□□□□ 0.84
NINLQ9Y2I6 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NINLQ9Y2I6 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
NINLQ9Y2I6 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NINLQ9Y2I6 RN7SKP214-201ENST00000364208 315 ntBASIC20.28■□□□□ 0.84
NINLQ9Y2I6 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC20.28■□□□□ 0.84
NINLQ9Y2I6 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC20.28■□□□□ 0.84
NINLQ9Y2I6 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NINLQ9Y2I6 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NINLQ9Y2I6 AC104784.1-201ENST00000473096 294 ntBASIC20.28■□□□□ 0.84
NINLQ9Y2I6 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC20.28■□□□□ 0.84
NINLQ9Y2I6 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NINLQ9Y2I6 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC20.28■□□□□ 0.84
NINLQ9Y2I6 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC20.28■□□□□ 0.84
NINLQ9Y2I6 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC20.28■□□□□ 0.84
NINLQ9Y2I6 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NINLQ9Y2I6 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC20.28■□□□□ 0.84
NINLQ9Y2I6 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC20.28■□□□□ 0.84
NINLQ9Y2I6 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
NINLQ9Y2I6 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
NINLQ9Y2I6 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
NINLQ9Y2I6 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NINLQ9Y2I6 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NINLQ9Y2I6 AC139712.1-201ENST00000378256 1875 ntBASIC20.28■□□□□ 0.84
NINLQ9Y2I6 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC20.28■□□□□ 0.84
NINLQ9Y2I6 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NINLQ9Y2I6 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC20.28■□□□□ 0.84
NINLQ9Y2I6 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NINLQ9Y2I6 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NINLQ9Y2I6 CYP4F23P-201ENST00000593402 1579 ntBASIC20.28■□□□□ 0.84
NINLQ9Y2I6 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC20.28■□□□□ 0.84
NINLQ9Y2I6 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NINLQ9Y2I6 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
NINLQ9Y2I6 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
NINLQ9Y2I6 AC013726.1-201ENST00000563747 2285 ntBASIC20.27■□□□□ 0.84
NINLQ9Y2I6 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NINLQ9Y2I6 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NINLQ9Y2I6 AC144522.1-201ENST00000625111 1658 ntBASIC20.27■□□□□ 0.84
NINLQ9Y2I6 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NINLQ9Y2I6 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC20.27■□□□□ 0.84
NINLQ9Y2I6 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC20.27■□□□□ 0.84
NINLQ9Y2I6 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NINLQ9Y2I6 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NINLQ9Y2I6 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NINLQ9Y2I6 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NINLQ9Y2I6 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
NINLQ9Y2I6 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC20.27■□□□□ 0.84
NINLQ9Y2I6 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NINLQ9Y2I6 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NINLQ9Y2I6 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC20.27■□□□□ 0.84
NINLQ9Y2I6 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC20.27■□□□□ 0.84
NINLQ9Y2I6 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC20.27■□□□□ 0.84
NINLQ9Y2I6 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NINLQ9Y2I6 RBM8B-201ENST00000555532 525 ntBASIC20.27■□□□□ 0.84
NINLQ9Y2I6 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC20.27■□□□□ 0.84
NINLQ9Y2I6 RN7SL574P-201ENST00000581512 297 ntBASIC20.27■□□□□ 0.84
NINLQ9Y2I6 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NINLQ9Y2I6 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
NINLQ9Y2I6 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC20.27■□□□□ 0.84
NINLQ9Y2I6 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NINLQ9Y2I6 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NINLQ9Y2I6 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
NINLQ9Y2I6 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NINLQ9Y2I6 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NINLQ9Y2I6 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NINLQ9Y2I6 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC20.27■□□□□ 0.83
NINLQ9Y2I6 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NINLQ9Y2I6 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC20.27■□□□□ 0.83
NINLQ9Y2I6 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NINLQ9Y2I6 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NINLQ9Y2I6 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NINLQ9Y2I6 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NINLQ9Y2I6 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NINLQ9Y2I6 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NINLQ9Y2I6 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NINLQ9Y2I6 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NINLQ9Y2I6 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NINLQ9Y2I6 KHSRPP1-201ENST00000427983 1768 ntBASIC20.26■□□□□ 0.83
NINLQ9Y2I6 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NINLQ9Y2I6 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NINLQ9Y2I6 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NINLQ9Y2I6 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NINLQ9Y2I6 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NINLQ9Y2I6 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC20.26■□□□□ 0.83
NINLQ9Y2I6 MSRA-203ENST00000441698 788 ntTSL 2 BASIC20.26■□□□□ 0.83
NINLQ9Y2I6 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC20.26■□□□□ 0.83
NINLQ9Y2I6 CCNC-217ENST00000523985 958 ntTSL 2 BASIC20.26■□□□□ 0.83
NINLQ9Y2I6 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC20.26■□□□□ 0.83
NINLQ9Y2I6 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
NINLQ9Y2I6 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
NINLQ9Y2I6 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NINLQ9Y2I6 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC20.26■□□□□ 0.83
NINLQ9Y2I6 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC20.26■□□□□ 0.83
NINLQ9Y2I6 AL157813.1-201ENST00000612996 587 ntBASIC20.26■□□□□ 0.83
NINLQ9Y2I6 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
NINLQ9Y2I6 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
NINLQ9Y2I6 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NINLQ9Y2I6 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms