Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
VPS9D1Q9Y2B5 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
VPS9D1Q9Y2B5 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 KLF2P2-201ENST00000416807 1039 ntBASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 AC118282.1-201ENST00000506408 765 ntBASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 API5-211ENST00000534695 560 ntTSL 5 BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 AC009486.1-201ENST00000569860 813 ntBASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 RN7SL204P-201ENST00000582831 262 ntBASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 AC008507.2-201ENST00000588402 1176 ntBASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 LINC02084-201ENST00000606069 1096 ntBASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 AC020763.2-201ENST00000623155 1255 ntBASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 AP000280.1-201ENST00000624800 832 ntBASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.04■□□□□ -0
VPS9D1Q9Y2B5 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 LRRC59-203ENST00000576448 1531 ntBASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 RNU1-114P-201ENST00000365297 166 ntBASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 AC013410.2-201ENST00000422627 201 ntBASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 AC002472.2-201ENST00000442739 958 ntBASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.03■□□□□ -0
VPS9D1Q9Y2B5 TERF1P3-201ENST00000505638 1227 ntBASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms