Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 RNA5SP421-201ENST00000516864 134 ntBASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 ORC5-208ENST00000626700 344 ntTSL 3 BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 BTBD7P1-201ENST00000447253 1453 ntBASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 HAL-202ENST00000538703 2637 ntTSL 2 BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 WASH3P-207ENST00000560956 1394 ntBASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 RPL5P21-201ENST00000404620 815 ntBASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 ZNF890P-202ENST00000530367 1156 ntBASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 AC044860.1-202ENST00000559481 777 ntBASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 DUT-210ENST00000559935 569 ntTSL 3 BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 AF228730.6-201ENST00000641497 218 ntBASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 AC084121.3-201ENST00000641716 218 ntBASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HHLA3Q9XRX5 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 TK1-203ENST00000588734 1681 ntTSL 2 BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms