Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC20.03■□□□□ 0.8
PHF8Q9UPP1 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC20.03■□□□□ 0.8
PHF8Q9UPP1 DPY19L2P5-201ENST00000456300 331 ntBASIC20.03■□□□□ 0.8
PHF8Q9UPP1 RNA5SP417-201ENST00000516459 108 ntBASIC20.03■□□□□ 0.8
PHF8Q9UPP1 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC20.03■□□□□ 0.8
PHF8Q9UPP1 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
PHF8Q9UPP1 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHF8Q9UPP1 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHF8Q9UPP1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PHF8Q9UPP1 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHF8Q9UPP1 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHF8Q9UPP1 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHF8Q9UPP1 API5-203ENST00000455725 2257 ntTSL 2 BASIC20.02■□□□□ 0.8
PHF8Q9UPP1 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC20.02■□□□□ 0.8
PHF8Q9UPP1 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHF8Q9UPP1 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHF8Q9UPP1 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHF8Q9UPP1 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PHF8Q9UPP1 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHF8Q9UPP1 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PHF8Q9UPP1 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHF8Q9UPP1 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHF8Q9UPP1 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC20.02■□□□□ 0.8
PHF8Q9UPP1 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHF8Q9UPP1 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PHF8Q9UPP1 AL512306.1-201ENST00000432698 848 ntBASIC20.02■□□□□ 0.8
PHF8Q9UPP1 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC20.02■□□□□ 0.8
PHF8Q9UPP1 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC20.02■□□□□ 0.8
PHF8Q9UPP1 IGHVIII-5-2-201ENST00000522505 261 ntBASIC20.02■□□□□ 0.8
PHF8Q9UPP1 AC138701.2-201ENST00000553634 226 ntBASIC20.02■□□□□ 0.8
PHF8Q9UPP1 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC20.02■□□□□ 0.8
PHF8Q9UPP1 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC20.02■□□□□ 0.8
PHF8Q9UPP1 AC124068.2-201ENST00000569473 1109 ntBASIC20.02■□□□□ 0.8
PHF8Q9UPP1 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC20.02■□□□□ 0.8
PHF8Q9UPP1 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHF8Q9UPP1 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PHF8Q9UPP1 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.02■□□□□ 0.8
PHF8Q9UPP1 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
PHF8Q9UPP1 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PHF8Q9UPP1 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
PHF8Q9UPP1 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC20.02■□□□□ 0.79
PHF8Q9UPP1 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC20.02■□□□□ 0.79
PHF8Q9UPP1 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC20.02■□□□□ 0.79
PHF8Q9UPP1 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
PHF8Q9UPP1 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC20.01■□□□□ 0.79
PHF8Q9UPP1 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHF8Q9UPP1 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC20.01■□□□□ 0.79
PHF8Q9UPP1 LINC01101-201ENST00000622953 1884 ntBASIC20.01■□□□□ 0.79
PHF8Q9UPP1 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PHF8Q9UPP1 AC026471.1-201ENST00000564629 3026 ntBASIC20.01■□□□□ 0.79
PHF8Q9UPP1 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHF8Q9UPP1 USP4-203ENST00000415188 1454 ntTSL 3 BASIC20.01■□□□□ 0.79
PHF8Q9UPP1 WASH3P-207ENST00000560956 1394 ntBASIC20.01■□□□□ 0.79
PHF8Q9UPP1 AL136172.1-201ENST00000598590 1394 ntBASIC20.01■□□□□ 0.79
PHF8Q9UPP1 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC20.01■□□□□ 0.79
PHF8Q9UPP1 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHF8Q9UPP1 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHF8Q9UPP1 BCAS2P2-201ENST00000425064 674 ntBASIC20.01■□□□□ 0.79
PHF8Q9UPP1 IDS-203ENST00000428056 1213 ntTSL 2 BASIC20.01■□□□□ 0.79
PHF8Q9UPP1 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC20.01■□□□□ 0.79
PHF8Q9UPP1 ST13P19-201ENST00000442505 1124 ntBASIC20.01■□□□□ 0.79
PHF8Q9UPP1 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC20.01■□□□□ 0.79
PHF8Q9UPP1 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC20.01■□□□□ 0.79
PHF8Q9UPP1 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC20.01■□□□□ 0.79
PHF8Q9UPP1 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC20.01■□□□□ 0.79
PHF8Q9UPP1 KRT8P1-201ENST00000557533 1207 ntBASIC20.01■□□□□ 0.79
PHF8Q9UPP1 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC20.01■□□□□ 0.79
PHF8Q9UPP1 AC007952.4-201ENST00000573866 637 ntBASIC20.01■□□□□ 0.79
PHF8Q9UPP1 RN7SL275P-201ENST00000582762 335 ntBASIC20.01■□□□□ 0.79
PHF8Q9UPP1 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC20.01■□□□□ 0.79
PHF8Q9UPP1 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHF8Q9UPP1 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHF8Q9UPP1 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PHF8Q9UPP1 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PHF8Q9UPP1 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PHF8Q9UPP1 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHF8Q9UPP1 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
PHF8Q9UPP1 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHF8Q9UPP1 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PHF8Q9UPP1 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PHF8Q9UPP1 AC126365.1-201ENST00000578585 1514 ntBASIC20.01■□□□□ 0.79
PHF8Q9UPP1 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC20.01■□□□□ 0.79
PHF8Q9UPP1 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHF8Q9UPP1 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHF8Q9UPP1 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHF8Q9UPP1 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHF8Q9UPP1 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
PHF8Q9UPP1 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC20■□□□□ 0.79
PHF8Q9UPP1 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC20■□□□□ 0.79
PHF8Q9UPP1 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PHF8Q9UPP1 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC20■□□□□ 0.79
PHF8Q9UPP1 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PHF8Q9UPP1 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
PHF8Q9UPP1 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PHF8Q9UPP1 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC20■□□□□ 0.79
PHF8Q9UPP1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20■□□□□ 0.79
PHF8Q9UPP1 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC20■□□□□ 0.79
PHF8Q9UPP1 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PHF8Q9UPP1 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PHF8Q9UPP1 RN7SL396P-201ENST00000471086 295 ntBASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms